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Publications


Publications in year 2010

Names of researchers belonging to the Kochi/JAMSTEC are shown in bold font.



  • Geomicrobiology Group
  • Inagaki, F. (2010) Deep subseafloor microbial communities. In: Encyclopedia of Life Sciences, John Wiley & Sons, Ltd., Chichester, DOI: 10.1002/9780470015902.a0021894.
  • Morono, Y., and Inagaki, F. (2010) Automatic slide-loader fluorescent microscope system for high-throughput discriminative enumeration of subseafloor life. Sci. Drilling 9, 32-36.
  • Hoshino, T. and Schramm, A. (2010) Detection of denitrification genes by in situ rolling circle amplification-fluorescence in situ hybridization to link metabolic potential with identity inside bacterial cells. Environ. Microbiol. 12, 2508-2517
  • Lever, M. A., Heuer, V. B., Morono, Y., Masui, N., Schimidt, F., Alperin, M. J., Inagaki, F., Hinrichs, K.-U., and Teske, A. (2010) Acetogenesis in deep subseafloor sediments of the Juan de Fuca ridge flank: A synthesis of geochemical, thermodynamic, and gene-based evidence. Geomicrobiol. J. 27, 183-211.
  • Nunoura, T., Oida, H., Nakaseama, M., Kosaka, A., Ohkubo, S., Kikuchi, T., Kazama, H., Tanabe, S. H., Nakamura, K., Kinoshita, M., Hirayama, H., Inagaki, F., Tsunogai, U., Ishibashi, J., and Takai, K. (2010) Archaeal diversity and distribution along thermal and geochemical gradients in hydrothermal sediments at the Yonaguni Knoll IV, the Southern Okinawa Trough. Appl. Environ. Microbiol. 76, 1198-1211.
  • Stainsbu, B. O., Thorseth, I. H., Nakagawa, S., Inagaki, F., Lever, M. A., Engelen, B., Øvreås, L., and Pedersen, R. B. (2010) Archaeoglobus sulfaticallidus sp. nov., a thermophilic and facultatively lithoautotrophic sulfate-reducer isolated from black rust exposed to hot ridge flank crustal fluids. Int. J. Syst. Evol. Microbiol., 60, 2745-2752.
  • Takano, Y., Chikaraishi, Y., Ogawa, N. O., Nomaki, H., Morono, Y., Inagaki, F., Kitazato, H., Hinrichs, K.-U., and Ohkouchi, N. (2010) Sedimentary membrane lipids recycled by deep-sea benthic archaea. Nature Geoscience, 3, 858-861.
  • Yaganawa, K., Sunamura, M., Lever, M. A., Morono, Y., Hiruta, A., Matsumoto, R., Urabe, T., and Inagaki, F. (2011) Niche separation of anaerobic methanotrophs (ANME-1 and -2) in methane seep-sediments in the eastern Japan Sea off Joetsu. Geomicrobiol. J., in press.
  • Masaki, Y., Kinoshita, M., Inagaki, F., Nakagawa, S., and Takai, K. (2011) Indication for km-scale hydrothermal circulation within the Iheya-North field mid-Okinawa Trough inferred from heat flow data. Earth Planets and Space e-Letter, in press.
  • Hirayama, H., Suzuki, Y., Abe, M., Miyazaki, M., Makita, H., Inagaki, F., Uematsu, K., and Takai, K. (2011) Methylothermus subterraneus sp. nov., a moderately thermophilic methanotrophic bacterium from a terrestrial subsurface hot aquifer in Japan. Int. J. Syst. Evol. Microbiol., in press.
  • Geochemical Research Group
  • Takayanagi, H., Nakayama, Y., Ishikawa, T., Nagaishi, K., Iryu, Y.(2010) Sr isotope composition of island-surface dolomites at Kita-daito-jima, northern Philippine Sea. The Journal of the Geological Society of Japan, in press.
  • Nishio, Y., Okamura, K., Tanimizu, M., Ishikawa, T. and Sano, Y., 2010, Lithium and strontium isotopic systematics of waters around Ontake volcano, Japan: Implications for deep-seated fluids and earthquake swarms. Earth and Planetary Science Letters, 297, 567-576.
  • Ishikawa, T. and Nagaishi, K., 2011, High-precision isotopic analysis of boron by positive thermal ionization mass spectrometry with sample preheating. Journal of Analytical Atomic Spectrometry, 26, 359-365.
  • Tanimizu, M., Araki, Y., Asaoka, S. and Takahashi, Y., Determination of natural isotopic variation in antimony using inductively coupled plasma mass spectrometry for an uncertainty estimation of the standard atomic weight of antimony. Geochemical. Journal, in press.
  • Hamada, Y., Hirono, T. and Ishikawa, T., 2011, Coseismic frictional heating and fluid–rock interaction in a slip zone within a shallow accretionary prism and implications for earthquake slip behavior. Journal of Geophysical Research, 116, B01302, doi: 10.1029/2010JB007730.
  • Asaoka, S., Takahashi, Y., Araki, Y. and Tanimizu, M., Preconcentration method of antimony using modified thiol cotton fiber for isotopic analyses of antimony in natural samples. Analytical Science, in press.
  • Tanaka, K., Tani, Y., Takahashi, Y., Tanimizu, M., Suzuki, Y., Kozai, N. and Ohnuki, T., 2010, A specific Ce oxidation process during sorption of rare earth elements on biogenic Mn oxide produced by Acremonium sp. strain KR21-2. Geochimica et Cosmochimica Acta, 74, 5463-5477.
  • Tsunogai, U., Kosaka, A., Nakayama, N., Komatsu, D.D., Konno, U., Kameyama, S., Nakagawa, F., Sumino, H., Nagao, K., Fujikura, K., and Machiyama, H., 2010, Origin and fate of deep-sea seeping methane bubbles at Kuroshima knoll, Ryukyu forearc region, Japan. Geochemical Journal, 44, 46-476.
  • Toyofuku, T., Suzuki, M., Suga, H., Sakai, S., Suzuki, A., Ishikawa, T., Jan de Nooijer, L., Schiebel, R., Kawahata, H., and Kitazato, H., Mg/Ca and δ18O in the brackish shallow-water benthic foraminifer Ammonia ‘beccarii’. Marine Micropaleontology, in press.
  • Takayanagi, H., Iryu, Y., Oda, M., Sato, T., Chiyonobu, S., Nishimura, A., Nakazawa, T., Ishikawa, T., and Nagaishi, K., Temporal changes in biotic and abiotic composition of shallow-water carbonates on submerged seamounts in the northwestern Pacific Ocean and their controlling factors. Geodiversitas, in press.
  • Physical Property Research Group
  • Lin, W., Yeh, E.-C., Hung, J.-H., Haimson, B., Hirono, T. (2010) Localized rotation of principal stress around faults and fractures determined from borehole breakouts in hole B of the Taiwan Chelungpu-fault Drilling Project (TCDP). Tectonophysics. Vol. 482, Issues 1-4, 82-91. doi:10.1016/j.tecto.2009.06.020.
  • Di Toro G., Han R., Hirose T., De Paola N., Nielsen S., Mizoguchi K., Ferri F., Cocco M. and Shimamoto T., Fault lubrication during earthquakes, Nature. (in press)
  • Tanikawa, W. ,Sakaguchi, M., Tadai, O., Hirose, T. (2010) Influence of fault slip rate on shear-induced permeability, Journal of Geophysical Research, doi:10.1029/2009JB007013.
  • Tanikawa, W., Sakaguchi, M., Handoko Teguh Wibowo, H. T., Shimamoto, T., Tadai, O., (2010) Fluid transport properties and estimation of overpressure at the Lusi mud volcano, East Java Basin. Engineering Geology, 116 , 73–85.
  • Weiren Lin, M-L. Doan, J. C. Moore, L. McNeill, T. Byrne, T. Ito, D. Saffer, M. Conin, M. Kinoshita, Y. Sanada, K-T. Moe, E. Araki, H. Tobin, D. Boutt, Y. Kano, N. Hayman, P. Flemings, G. Huftile, D. Cukur, C. Buret, A. Schleicher, N. Efimenko, K. Kawabata, D. Buchs, S. JIANG, K. Kameo, K. Horiguchi, T. Wiersberg, A. Kopf, K. Kitada, N. Eguchi, S. Toczko, K. Takahashi, Y. Kido (2010), Present-day principal horizontal stress orientations in the Kumano forearc basin of the southwest Japan subduction zone determined from IODP NanTroSEIZE drilling Site C0009, Geophys. Res. Lett, Vol.37, L13303, doi: 10.1029/2010GL043158. 2010.
  • Weiren Lin, En-Chao Yeh, Jih-Hao Hung, Bezalel Haimson, Tetsuro Hirono, (2010), Localized rotation of principal stress around faults and fractures determined from borehole breakouts in hole B of the Taiwan Chelungpu-fault Drilling Project (TCDP), Tectonophysics, 482, 82-91, doi: 10.1016/j.tecto.2009.06.020.
  • Oohashi K., Hirose T. and Shimamoto T., Shear-induced graphitization of carbonaceous materials during seismic fault motion: experiments and possible implications for fault mechanics, Journal of Structural Geology. (in press)
  • De Paola, N., T. Hirose, T. Mitchell, G. Di Toro, C. Viti, and T. Shimamoto (2011), Fault lubrication and earthquake propagation in thermally unstable rocks, Geology, 39, 35-38.
  • Viti C., and T. Hirose (2010), Thermal decomposition of serpentine during coseismic faulting: nanostructures and mineral reactions, Journal of Structural Geology, 32(10), 1476-1484.
  • Bezalel Haimson, Weiren Lin, Haruyuki Oku, Jih-Hao Hung, Sheng-Rong Song, (2010), Integrating borehole breakout dimensions, strength criteria, and leak-off test results, to constrain the state of stress across the Chelungpu Fault, Taiwan, Tectonophysics, 482, 65-72, doi: 10.1016/j.tecto.2009.05.016.
  • Nielsen, S., P. Mosca, G. Giberti, G. Di Toro, T. Hirose, and T. Shimamoto (2010), On the transient behavior of frictional melt during seismic slip, Journal of Geophysical Research, 115, B10301, doi:10.1029/2009JB007020.
  • Ferri, F., G. Di Toro, T. Hirose, and T. Shimamoto (2010), Evidence of thermal pressurization in high-velocity friction experiments on smectite-rich gouges, Terra Nova, 22(5), 347-353.
  • Matsumoto, D., Shimamoto, T., Hirose, T., Gunatilake, J., Wickramasooriya, A., DeLile, J., Young, S., Rathnayake, C., Ranasooriya, J. and Murayama, M., 2010, Thickness and grain-size distribution of the 2004 Indian Ocean tsunami deposits in Periya Kalapuwa Lagoon, eastern Sri Lanka, Sedimentary Geology, 230, 95-104.
  • Han, R., T. Hirose, and T. Shimamoto (2010), Strong velocity weakening and powder lubrication of simulated carbonate faults at seismic slip rates, Journal of Geophysical Research, 115,B03412, doi:10.1029/2008JB006136.
  • Stünitz H., Keulenb N., Hirose T., and Heilbronnerb R., (2010), Grain size distribution and
    microstructures of experimentally sheared granitoid gouge at coseismic slip rates – criteria to distinguish seismic and aseismic faults? Journal of Structural Geology, 32, 59-69.
  • Chang, C., L. C. McNeill, J. C. Moore, W. Lin, M. Conin, and Y. Yamada (2010), In situ stress state in the Nankai accretionary wedge estimated from borehole wall failures, Geochem. Geophys. Geosyst., 11, Q0AD04, doi:10.1029/2010GC003261.
  • Doan, M.-L., M. Conin, P. Henry, T. Wiersberg, D. Boutt, D. Buchs, D. Saffer, L. C. McNeill, D. Cukur, and W. Lin (2011), Quantification of free gas in the Kumano fore-arc basin detected from borehole physical properties: IODP NanTroSEIZE drilling Site C0009, Geochem. Geophys. Geosyst., 12, Q0AD06, doi:10.1029/2010GC003284.
  • Science Service Group
  • Misawa, K., Kohono, M., Tomiyama, T., Noguchi, T., Nakamura, T., Nagao, K., Mikouchi, T., Nishiizumi, K. (2010) Two extraterrestrial dust horizons found in the Dome Fuji ice core, East Antarctica. Earth Planet. Sci.Lett., Vol. 289, Issues 1-2, 287-297.

 
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