JAMSTEC > JAMSTEC研究者総覧 > 山本 啓之

JAMSTEC研究者総覧

更新日：2016/06/03

  • 山本 啓之
  • ヤマモト ヒロユキ
所属
SIP海洋統括プロジェクトチーム　海洋環境影響評価システム開発プロジェクトチーム　プロジェクト長
キャリア
特任上席研究員

プロフィール

専門
微生物生態学
連絡先
横須賀本部　〒237-0061　神奈川県横須賀市夏島町2番地15
所属学会
日本微生物生態学会、日本生態学会、日本生態学会、ASM、ISME、IAIA

研究業績

査読有り（JAMSTECでの成果）

  • Nana Yoshioka, Shinsuke Kawagucci, Tetsuya Miwa, Hiroyuki Yamamoto. Video analysis of an ecological monitoring at 2022 spring using Deep-sea deployed 495 camera (EDOKKO Mark 1 series) in the seabed of off Minamitori Island. 2023 IEEE Underwater Technology (UT23), 2023, p. 495-499
  • Hiroyuki Yamamoto, Masanobu Kawachi, Koichi Iijima, Shinsuke Kawagucci, Tetsuya Miwa, Kentaro Inomata, Masanori Kyo, Hiroshi Koshikawa, Kosuke Tsutsumi, Koichi Yoshida. Practice of marine environmental impact assessment and monitoring using ISO standards. 2023 IEEE Underwater Technology, 2023, p. 37-41
  • Sasano Masahiko, Okamoto Akihiro, Inaba Shogo, Fujiwara Toshifumi , Yamamoto Hiroyuki , Asakawa Eiichi, Takashima Sotaro. Applications for Autonomous Control of Multiple AUVs Toward Deep-Sea Resource Explorations. OCEANS 2022, 2022, p. 1-5, doi: 10.1109/OCEANS47191.2022.9977237
  • Hisako Hirayama, Yoshihiro Takaki, Mariko Abe, Hiroyuki Imachi, Tetsuro Ikuta, Junichi Miyazaki, Eiji Tasumi, Katsuyuki Uematsu, Akihiro Tame, Miwako Tsuda, Keiko Tanaka, Yohei Matsui, Hiromi Kayama Watanabe, Hiroyuki Yamamoto, Ken Takai. Multispecies populations of methanotrophic Methyloprofundus and cultivation of a likely dominant species from the Iheya North deep-sea hydrothermal field. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2022, 88, 2, doi: 10.1128/AEM.00758-21
  • Shinsuke Kawagucci​, Tetsuya Miwa, Dhugal J. Lindsay, Eri Ogura, Hiroyuki Yamamoto, Kenichiro Nishibayashi, Hiroyuki Yokooka, Shotaro Nishi, Ayu Takahashi, Sangkyun Lee. Deep-sea water displacement from a turbidity current induced by the Super Typhoon Hagibis. PeerJ, 2020, 8, doi: 10.7717/peerj.10429
  • Hiromi K. Watanabe, Chong Chen, Shigeaki Kojima, Shogo Kato and Hiroyuki Yamamoto. Population connectivity of the crab Gandalfus yunohana (Takeda, Hashimoto & Ohta, 2000) (Decapoda: Brachyura: Bythograeidae) from deep-sea hydrothermal vents in the northwestern Pacific. JOURNAL OF CRUSTACEAN BIOLOGY, 2020, 40, 5, p. 556-562, doi: 10.1093/jcbiol/ruaa045
  • Jeffrey C. Drazen, Craig R. Smith, Kristina M. Gjerde, Steven H. D. Haddock, Glenn S. Carter, C. Anela Choy, Malcolm R. Clark, Pierre Dutrieux, Erica Goetze, Chris Hauton, Mariko Hatta, J. Anthony Koslow, Astrid B. Leitner, Aude Pacini, Jessica N. Perelman, Thomas Peacock, Tracey T. Sutton, Les Watling, and Hiroyuki Yamamoto. Midwater Ecosystems Must Be Considered When Evaluating Environmental Risks of Deep-Sea Mining. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117, 30, p. 17455-17460, doi: 10.1073/pnas.2011914117
  • 山本啓之. 新たな技術による海洋生物群集の調査観測と環境影響評価. 物理探査, 2020, 73, p. 53-63, doi: 10.3124/segj.73.53
  • 後藤 浩一, 福原 達雄, 近藤 俊祐, 高島 創太郎, 古島 靖夫, 山本 啓之. 環境影響評価の現場観測：海底資源開発に向けて. 物理探査, 2020, 73, p. 64-73, doi: 10.3124/segj.73.64
  • Tomo Kitahashi, Sachie Sugime, Kentaro Inomata, Miyuki Nishijima, Shogo Kato, Hiroyuki Yamamoto. Meiofaunal diversity at a seamount in the pacific ocean: A comprehensive study using environmental DNA and RNA. DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS, 2020, 160, doi: 10.1016/j.dsr.2020.103253
  • 山本啓之. 海底鉱物資源開発に関わる環境調査と影響評価の現状と展開. 資源地質, 2019, 69, 2, p. 79-95
  • Tzu-Hao Lin, Chong Chen, Hiromi Kayama Watanabe, Shinsuke Kawagucci, Hiroyuki Yamamoto, Tomonari Akamatsu. Using soundscape to assess deep-sea benthic ecosystems. TRENDS IN ECOLOGY & EVOLUTION, 2019, 34, 12, p. 1069-1071, doi: 10.1016/j.tree.2019.09.006
  • Hiromi Kayama Watanabe, Shuichi Shigeno, Katsunori Fujikura, Takaaki Matsui, Shogo Kato, Hiroyuki Yamamoto. Faunal composition of deep-sea hydrothermal vent fields on the Izu-Bonin-Mariana Arc, northwestern Pacific. DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS, 2019, 149, doi: 10.1016/j.dsr.2019.05.010
  • Ryota Nakajima　Chong Chen　Ryoichi Iwase　Hiroyuki Yamamoto　Katsunori Fujikura. Clams after storms: the impact of multiple disturbances on seep vesicomyid clams revealed by long-term monitoring. MARINE BIOLOGY, 2019, 166, 3, doi: 10.1007/s00227-019-3484-6
  • Jeffrey C Drazen, Craig R Smith, Kristina Gjerde, Whitlow Au, Jesse Black, Glenn Carter, Malcolm Clark, Jennifer M Durden, Pierre Dutrieux, Erica Goetze, Steven Haddock, Mariko Hatta, Chris Hauton, Paul Hill, Julian Koslow, Astrid B Leitner, Chris Measures, Aude Pacini, Frank Parrish, Thomas Peacock, Jessica Perelman, Tracey Sutton, Celine Taymans, Verena Tunnicliffe, Les Watling, Hiroyuki Yamamoto, Emily Young, Amanda F Ziegler. Report of the workshop Evaluating the nature of midwater mining plumes and their potential effects on midwater ecosystems. Research Ideas and Outcomes, 2019, 5, doi: 10.3897/rio.5.e33527
  • Kitahashi, Tomo; Watanabe, Hiromi Kayama; Tsuchiya, Masashi; Yamamoto, Hideyuki; Yamamoto, Hiroyuki. A new method for acquiring images of meiobenthic images using the FlowCAM. MethodsX, 2018, 5, p. 1330-1335, doi: 10.1016/j.mex.2018.10.012
  • Watsuji T, Motoki K, Hada E, Nagai Y, Takaki Y, Yamamoto A, Ueda K, Toyofuku T, Yamamoto H, Takai K.. Compositional and Functional Shifts in the Epibiotic Bacterial Community of Shinkaia crosnieri Baba & Williams (a Squat Lobster from Hydrothermal Vents) during Methane-Fed Rearing. MICROBES AND ENVIRONMENTS, 2018, 33, 4, p. 348-356, doi: 10.1264/jsme2.ME18072
  • Kenta Suzuki, Katsuhiko Yoshida, Hiromi Watanabe, Hiroyuki Yamamoto. Mapping the resilience of chemosynthetic communities in hydrothermal vent fields. Scientific Reports, 2018, 8, doi: 10.1038/s41598-018-27596-7
  • Tatsuhiro FUkuba, Jin Kyu Choi, Yasuo Furushima, Tetsuya Miwa, Hiroyuki Yamamoto. Lander Observatory with Non-Contact Power Supply and Communication Interfaces for Long-Term Ecosystem Monitoring in Deep-Sea. The Proceedings of The Twenty-eighth (2018) International Ocean and Polar Engineering Conference (ISOPE 2018), 2018, p. 124-127
  • Yasuo Furushima, Hironori Higashi, Tatsuo Fukuhara, Takeya Matsuda, Hiroyuki Yamamoto,Naoki Furuichi, Tomohiko Fukushima. Periodic behavior of abyssal flow in Okinawa Trough hydrothermal fields. Proc. 28th Int. Ocean and Polar Eng. Conf, Sapporo, ISOPE, 2018, 1, p. 119-123
  • Masako Nakamura, Yuichi Nakajima, Hiromi Kayama Watanabe, Takenori Sasaki, Hiroyuki Yamamoto, Satoshi Mitarai. Spatial variability in recruitment of benthos near drilling sites in the Iheya North hydrothermal field in the Okinawa Trough. DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS, 2018, 135, p. 65-73, doi: 10.1016/j.dsr.2018.03.009
  • C.L. Van Dovera, S. Arnaud-Haondb, M. Giannic, S. Helmreichd, J.A. Hubere, A.L. Jaeckelf, A. Metaxasg, L.H. Pendletonh, S. Peterseni, E. Ramirez-Llodraj, P.E. Steinbergk, V. Tunnicliffel, H. Yamamoto. Scientific rationale and international obligations for protection of active T hydrothermal vent ecosystems from deep-sea mining. MARINE POLICY, 2018, 90, p. 20-28, doi: 10.1016/j.marpol.2018.01.020
  • Takehisa Yamakita, Kenji Sudo, Yoshie Jintsu-Uchifune, Hiroyuki Yamamoto, Yoshihisa Shirayama. Identification of important marine areas using ecologically or biologically significant areas (EBSAs) criteria in the east to southeast Asia region and comparison with existing registered areas for the purpose of conservation. MARINE POLICY, 2017, 81, p. 273-284, doi: 10.1016/j.marpol.2017.03.040
  • Hiromi Watanabe, Takuya Yahagi, Yukiko Nagai, MiHye Seo, Shigeaki Kojima, Jun-ichiro Ishibashi, Hiroyuki Yamamoto, Katsunori Fujikura, Satoshi Mitarai, Takashi Toyofuku. Different thermal preferences for brooding and larval dispersal of two neighboring shrimps in deep-sea hydrothermal vent fields. Marine Ecology-An Evolutionary Perspective, 2016, 37, 6, p. 1282-1289, doi: 10.1111/maec.12318
  • Hiromi Kayama Watanabe, Reina Senokuchi, Motohiro Simanaga, Hiroyuki Yamamoto. Comparison of the efficiency of three methods of DNA extraction for deep-sea benthic copepods. JAMSTEC Report of Research and Development, 2016, 23, p. 52-59, doi: 10.5918/jamstecr.23.52
  • KANAE KOMAKI, YASUO FURUSHIMA, HIROYUKI YAMAMOTO. 3D characteristics of ADCP echo intensity anomaly observed over the Snail, Archean, and Pika hydrothermal vent fields in the South Mariana Trough. Geochemical Journal, 2016, 50, doi: 10.2343/geochemj.2.0428
  • Frédéric Sinniger, Jan Pawlowski, Saki Harii, Andrew J. Gooday, Hiroyuki Yamamoto, Pierre Chevaldonne, Tomas Cedhagen, Gary Carvalho,Simon Creer. Worldwide Analysis of Sedimentary DNA Reveals Major Gaps in Taxonomic Knowledge of Deep-Sea Benthos. Frontier in Marine Science, 2016, 3, 92, p. 1-14, doi: 10.3389/fmars.2016.00092
  • Tsuchiya, M., Toyofuku, T., Uematsu, K., Bruchert, V., Collen, J., Yamamoto, H., Kitazato, H.. Cytologic and Genetic Characteristics of Endobiotic Bacteria and Kleptoplasts of Virgulinella fragilis (Foraminifera). Journal of Eukaryotic Microbiology, 2015, 62, p. 454-469, doi: 10.1111/jeu.12200
  • Nakajima, R., Yamamoto, H., Kawagucci, S., Takaya, Y., Nozaki, T., Chen, C., Fujikura, K., Miwa, T., and Takai, K. Post-drilling changes in seabed landscape and megabenthos in a deep-sea hydrothermal system, the Iheya North field, Okinawa Trough. PLoS One, 2015, 10, 4, p. e0123095, doi: 10.1371/journal.pone.0123095
  • Nakajima, R., Yamamoto, H., Kawagucci, S., Takaya, Y., Nozaki, T., Chen, C., Fujikura, K., Miwa, T. and Takai, K.. Post-drilling changes in seabed landscape and megabenthos in a deep-sea hydrothermal system, the Iheya North field, Okinawa Trough. PLoS One, 2015, 10, 4, doi: 10.1371/journal.pone.0123095
  • Hiroyuki Yamamoto, Tomoko Maruyama, Laszlo G.-Toth, Kenji Kato, Yasuo Furushima, Naoto Taira, Yoshiaki Maeda, Kiminori Shitashima. In Situ Determination of Bacterial Growth in Mixing Zone of Hydrothermal Vent Field on the Hatoma Knoll, Southern Okinawa Trough. Subseafloor Biosphere Linked to Hydrothermal Systems,TAIGA Concept/Springer, 2015, p. 437-447, doi: 10.1007/978-4-431-54865-2_33
  • Takehisa Yamakita, Hiroyuki Yamamoto, Masahiro Nakaoka, Hiroya Yamano, Katsunori Fujikura, Kiyotaka Hidaka, Yuichi Hirota, Tadafumi Ichikawa, Shigeho Kakehi, Takahiko Kameda, Satoshi Kitajima, Kazuhiro Kogure, Teruhisa Komatsu, Naoki H. Kumagai, Hiroomi Miyamoto, Kazushi Miyashita, Haruyuki Morimoto, Ryota Nakajima, Syuhei Nishida, Kou Nishiuchi, Shingo Sakamoto, Masayoshi Sano, Kenji Sudo, Hiroya Sugisaki,Kazuaki Tadokoro, Katsuhiko Tanaka, Yoshie Uchifune-Jintsu, Kentaro Watanabe, Hiromi Watanabe, Yumiko Yara, Norishige Yotsukura, Yoshihisa Shirayama. Identification of important marine areas around the Japanese Archipelago: Establishment of a protocol for evaluating a broad area using ecologically and biologically significant areas selection criteria. Marine Policy, 2014, 51, p. 136-147, doi: 10.1016/j.marpol.2014.07.009
  • Ryota Nakajima, Tetsuya Komuku, Takehisa Yamakita, Dhugal J. Lindsay, Yoshie Jintsu-Uchifune, Hiromi Watanabe, Katsuhiko Tanaka, Yoshihisa Shirayama, Hiroyuki Yamamoto, and Katsunori Fujikura. A new method for estimating the area of the seafloor from oblique images taken by deep-sea submersible survey platforms. JAMSTEC Report of Research and Development, 2014, 19, p. 59-66, doi: 10.5918/jamstecr.19.59
  • 海洋生物情報の公開と応用展開. JAMSTEC Report of Research and Development, 2014, 18, p. 81-88
  • Ryota Nakajima, Takehisa Yamakita, Hiromi Watanabe, Katsunori Fujikura, Katsuhiko Tanaka, Hiroyuki Yamamoto, Yoshihisa Shirayama. Species richness and community structure of benthic macrofauna and megafauna in the deep-sea chemosynthetic ecosystems around the Japanese Archipelago: an attempt to identify priority areas for conservation. Diversity and Distributions, 2014, 20, p. 1160-1172
  • Hisako Hirayama, Mariko Abe, Masayuki Miyazaki, Takuro Nunoura, Yasuo Furushima, Hiroyuki Yamamoto, Ken Takai. Methylomarinovum caldicuralii gen. nov., sp., nov., a moderately thermophilic methanotroph isolated from a shallow submarine hydrothermal system, and proposal of the family Methylothermaceae fam. nov.. International Journal of Systematic and Evolutionary Microbiology, 2014, 64, 3, p. 989-999, doi: 10.1099/ijs.0.058172-0
  • 田中克彦・新井隆弘・岸良武文・山内束・齋藤秀亮・華房康憲・園田朗・古島靖夫・山本啓之・藤倉克則・丸山正. 海洋生物情報の公開と応用展開. JAMSTEC-R, 2014, 18, p. 81-88
  • Lindsay D.J., Yamaguchi A., Grossmann M.M., Nishikawa J., Sabates A., Fuentes V., Hall M., Sunahara K., Yamamoto H.. Vertical profiles of marine particulates: a step towards global scale comparisons using an Autonomous Visual Plankton Recorder. 日本プランクトン学会報, 2014, 61, 1, p. 72-81, doi: 10.24763/bpsj.61.1_72
  • Kawagucci, S., Miyazaki, J., Nakajima, R., Nozaki, T., Takaya, Y., Kato, Y., Shibuya, T., Konno, U., Nakaguchi, Y., Hatada, K., Hirayama. H., Fujikura, K., Furushima, Y., Yamamoto, H., Watsuji, T., Ishibashi, J., Takai, K.. Post-drilling changes in fluid discharge pattern, mineral deposition, and fluid chemistry in the Iheya North hydrothermal field, Okinawa Trough. GEOCHEMISTRY GEOPHYSICS GEOSYSTEMS, 2013, 14, 11, p. 4774-4790, doi: 10.1002/2013GC004895
  • Takuro Nunoura, Miho Hirai, Masayuki Miyazaki, Hiromi Kazama, Hiroko Makita, Hisako Hirayama, Yasuo Furushima, Hiroyuki Yamamoto, Hiroyuki Imachi, Ken Takai. Isolation and characterization of a thermophilic, obligately anaerobic and heterotrophic marine Chloroflexi bacterium from a Chloroflexi dominated microbial community associated with a Japanese shallow hydrothermal system, and proposal for Thermomarinilinea lacunofontalis gen. nov., sp. nov.. Microbes & Environments, 2013, 28, 2, p. 228-235, doi: doi:10.1264/jsme2.ME12193
  • Nunoura T, Hirai M, Miyazaki M, Kazama H, Makita H, Hirayama H, Furushima Y, Yamamoto H, Imachi H, Takai K. Isolation and characterization of a thermophilic, obligately anaerobic and heterotrophic marine Chloroflexi bacterium from a Chloroflexi dominated microbial community associated with a Japanese shallow hydrothermal system, and proposal for Thermomarinilinea lacunofontalis gen. nov., sp. nov.. Microbes and Environments, 2013, 28, 2, p. 228-235
  • Ken Takai., Shinsuke Kawagucci, Junichi Miyazaki, Tomorou Watsuji, Junichiro Ishibashi, Hiroyuki Yamamoto, Tatsuo Nozaki, Teruhiko Kashiwabara, and Takazo Shibuya. Post-drilling hydrothermal vent and associated biological activities seen through artificial hydrothermal vents in the Iheya North field, Okinawa Trough. International Symposium on Underwater Technology 2013, 2013, doi: 10.1109/UT.2013.6519910
  • Patrick Colman Collins, Peter Croot, Jens Carlsson, Ana Colac-o, Anthony Grehan, Kiseong Hyeong, Robert Kennedy, Christian Mohn, Samantha Smith, Hiroyuki Yamamoto, Ashley Rowden. A primer for the Environmental Impact Assessment of mining at seafloor massive sulfide deposits. Marine Policy, 2013, 42, p. 198-209
  • Hisako Hirayama, Hiroyuki Fuse, Mariko Abe, Masayuki Miyazaki, Takamichi Nakamura, Takuro Nunoura, Yasuo Furushima, Hiroyuki Yamamoto, Ken Takai. Methylomarinum vadi gen. nov., sp. nov., a methanotroph isolated from two distinct marine environments.. International Journal of Systematic and Evolutionary Microbiology, doi: 10.1099/ijs.0.040568-0, 2012, 63, 3, p. 1073-1082, doi: 10.1099/ijs.0.040568-0
  • Shinji Tsuchida, Yohei Suzuki, Yoshihiro Fujiwara, Masaru Kawato, Katsuyuki Uematsu, Toshihiro Yamanaka, Chitoshi Mizota, Hiroyuki Yamamoto. Epibiotic association between filamentous bacteria and the vent-associated galatheid crab, Shinkaia cronieri (Decapoda: Anomura). Journal of the Marine Biological Association of the United Kingdom, 2011, 91, p. 23-32
  • In situ observation of the Denise's pygmy seahorse Hippocampus denise associated with a gorgonian coral Annella reticulata at Osprey Reef, Australia. Galaxea, Journal of Coral Reef Studies, 2011, 13, p. 25-26
  • NAGAO Masayuki., Y. FURUSHIMA, Atsushi. SUZUKI, Hiroyuki. YAMAMOTO, T. MARUYAMA. RELATIVE BUBBLE DENSITY AND FLUX DISCHARGED FROM AN UNDERWATER GEYSER VARYING WITH TIDE.. Annual Journal of Hydraulic Engineering, JSCE, 2011, 55, p. 211-216
  • Hidenori Kumagai, Satoshi Tsukioka , Hiroyuki YAMAMOTO , Takeshi Tsuji , Kiminori Shitashima , Miho Asada , Fujio Yamamoto , Masataka Kinoshita. Data Brief: Hydrothermal plumes imaged by high-resolution side-scan sonar on a cruising AUV, Urashima. Geochem. Geophys. Geosyst., 2010, 11, 12, p. Q12013
  • Masayuki Nagao, Y. Furushima, A. Suzuki, Hiroyuki Yamamoto, T. Maruyama. Periodicity of an underwater geyser varying with tide.. The GOSA Transactions, 11:131-144, 2010, 11, p. 131-144
  • Gin Kinoshita, Masaru Kawato, Ayuta Shinozaki, Tomoko Yamamoto, Kenji Okoshi, Kaoru Kubokawa, Hiroyuki Yamamoto, Yoshihiro Fujiwara. Protandric hermaphorditism in the whale-fall mussel Adipicola pacifica.. Cah. Biol. Mar., 2010, 51, p. 423-427
  • Watanabe H., Yamamoto H., Asada M., Sunamura M. Pictorial2: Investigations at hydrothermal Vent Fields bu AUV Urashima. 地学雑誌, 2010, vol.118, No.6, p. xxii-xxiii
  • Akihiko Takemura, Satoshi Tamotsu, Tetsuya Miwa, Hiroyuki Yamamoto. Preliminary results on the reproduction of a deep-sea snailfish Careprotus rhodomelas around the active hydrothermal vent on the Hatoma Knoll, Okinawa. Japan. J. Fish Biol., 2010, 77, p. 1709-1715
  • Hidenori Kumagai, Satoshi Tsukioka, Hiroyuki Yamamoto, Takeshi Tsuji, Kiminori Shitashima, Miho Asada, Fujio Yamamoto, Masataka Kinoshita. Hydrothermal plumes imaged by high‐resolution side‐scan sonar on a cruising AUV, Urashima.. Geochemistry Geophysics Geosystems, 2010, 11, doi: 10.1029/2010GC003337
  • H. Kimura,M. Sugihara , H. Yamamoto , Patel BKC , K. Kato , S. Hanada. Microbial community in a geothermal aquifer associated with the subsurface of the Great Artesian Basin, Australia. EXTREMOPHILES, 2005, 9, 5, p. 407-414
  • 山本 啓之,藤倉克則、平石明、加藤憲二、牧陽之助. Phylogenetic characterization and biomass estimation of bacterial endosymbionts associated with invertebrates dwelling in chemosynthetic communities of hydrothermal vent and cold seep fields.. Marine Ecology Progress Series 245/ 61-67, 2002
  • Phylogenetic characterization and biomass estimation of bacterial endosymbionts associated with invertebrates dwelling in chemosynthetic communites of hydrothermal vent and cold seep fields. Marine Ecology Progress Series, 2002, 245, p. 61-67

査読無し（JAMSTECでの成果）

  • Dhugal Lindsay, Hiroshi Yoshida, Shojiro Ishibashi, Mitsuko Umetsu, Atsushi Yamaguchi, Hiroyuki Yamamoto, Jun Nishikawa, James Davis Reimer, Hiromi Watanabe, Katsunori Fujikura, Tadashi Maruyama. The uROV PICASSO, the Visual Plankton Recorder, and other attempts to image plankton. Proceedings of the International Symposium on Underwater Technology 2013, 2013, p. 1-3, doi: 10.1109/UT.2013.6519854
  • Nagao Masayuki., Y. Furushima, Atushi Suzuki, Hiroyuki Yamamoto, T. Maruyama. The influence of tidal level on periodicity of an undersea geyser: an application of acoustic Doppler current meter.. Proceedings of the OCEANS 2011 MTS/IEEE KONA Conference & Exhibition, 2011
  • Impacts of hydrothermal plume to oceanic environment from subseafloor zone. Aquabiology, 2010, 32, p. 143-149
  • 山本 啓之. 地球生態系における光合成微生物群集の役割.. 光合成微生物の機能と応用 上原　赫編集.　大阪：ジーエムシー出版, 2006, p. 72-80
  • 山本 啓之. 第28章　深海底から見上げる海洋生態系の姿. 美ら島の自然史ーサンゴ礁島嶼系の生物多様性. 琉球大学21世紀COEプログラム編集委員会編. 東海大学出版会, 2006, p. 388-401
  • 山本 啓之. 第１章　地球の生い立ちと生命の歴史 - 惑星に生物圏が生まれる.　微生物ってなに？. 日本微生物生態学会教育研究部会編集　東京: 日科技連, 2006, p. 1-18
  • 山本 啓之. 海から学ぶ 生物圏を支える微生物. Blue Earth, 2006, 87, p. 32-35
  • Asakawa K, Goto T, Mitsuzawa K, Yokobiki T, Araki E, Kinoshita M, Nakamura H, Kojima J, Kawaguchi K, Kitazato H, Kazumasa Oguri, Yamamoto H, Fujikura K, Kuramoto S, Masago H. New cable projects in JAMSTEC. Proc. 4th International Workshop on Scientific Use of Submarine Cables and Related Technologies, 2006, p. 271-276

図書（JAMSTECでの成果）

  • Takehisa Yamakita, Hiroyuki Yamamoto, Yuka Yokoyama, Izumi Sakamoto, Shinji Tsuchida, Dhugal Lindsay, Yoshihiro Fujiwara, Masaru Kawato, Takafumi Kasaya, Hiroshi Kitazato. Distribution of the marine debris on seafloor from the primary report of five cruises after the Great East Japan Earthquake 2011. Marine Productivity: Perturbations and Resilience of Socio-ecosystems (2015), pp. 101-109,, 2015, p. 101-109, doi: 10.1007/978-3-319-13878-7_11
  • Lindsay D.J., Umetsu M., Grossmann M.M., Miyake H., Yamamoto H.. The gelatinous macroplankton community at the Hatoma Knoll hydrothermal vent. Subseafloor Biosphere Linked to Global Hydrothermal Systems; TAIGA Concept. Springer, Japan. [Ishibashi, J., Okino, K. and Sunamura, M.(eds.)], 2015, 51, p. 639-666, doi: DOI 10.1007/978-4-431-54865-2_51
  • Hiroyuki Yamamoto, Katsuhiko Tanaka, Katsunori Fujikura, and Tadashi Maruyama. BISMaL: Biological Information System for Marine Life and Role for Biodiversity Research. Ecological Research Monographs, Part 3. The Biodiversity Observation Network in the Asia-Pacific Region, 2012, p. 247-256, doi: 10.1007/978-4-431-54032-8

口頭発表・招待講演（JAMSTECでの成果）

  • Takehisa Yamakita, Hiroyuki Yamamoto (JAMSTEC), Yuka Yokoyama, Izumi Sakamoto (To-kai Univ.), Yoshihiro Fujiwara, Shinji Tsuchida, Masaru Kawato, Dhugal Lindsay, Takafumi Kasaya, Hiroshi Kitazato (JAMSTEC). Mapping the state of the marine ecosystem after the Great East Japan Earthquake 2011. the 15th edition of the French-Japanese Oceanography Conference, 2013, p. 51
  • 山本啓之. 海洋における環境影響評価の役割. 資源素材学会関東支部会、第9回技術と研究の交流会, 2012
  • Hiroyuki Yamamoto, Yoshihisa Shirayama. Integrative observations and assessments of marine biodiversity from reef to deep sea. The 5th EAFES International Congress with the 59th Annual Meeting of the Ecological Society of Japan, 2012
  • 土屋 正史,力石 嘉人,大河内 直彦,高野 淑識,小川 奈々子,藤倉 克則,吉田 尊雄,喜多村 稔,Dhugal J. Lindsay,藤原 義弘,野牧 秀隆,豊福 高志,山本 啓之,丸山 正,和田 英太郎. アミノ酸窒素同位体比に基づく海洋生態系の食物網構造の解析. 2010年度日本地球化学会年会, 2010
  • 山本 啓之. 海洋における微生物ループと物質循環. 第55回日本地球化学会年会, 2008
  • Hiroyuki Yamamoto. Overview of Subsurface Life proposals currently active in the IODP system.. Workshop for Exploring the Deep Biosphere with the Integrated Ocean Drilling Program, 2006

口頭発表（JAMSTECでの成果）

  • 土屋 正史 , 北橋 倫 , 渡部 裕美 , 藤木 徹一 , 大河原 にい菜 , 立花 愛子 , 山本 啓之. FlowCamを用いた底生有孔虫群集の迅速解析手法の開発. 日本古生物学会第165回例会, 2016
  • Metazoan environmental DNA as a tool to estimate deep-sea biodiversity. 2014年合同大会ベントス学会, 2015
  • Lindsay, Grossmann, Umetsu, Yamamoto. Horizontal advection of mesopelagic communities: effects on biodiversity and niche partitioning. 14th Deep Sea Biology Symposium (Aveiro, Portugal), 2015
  • Takehisa Yamakita, Kazumasa Oguri, Hiroyuki Yokooka, Ken Ikehara , Yoshihiro Fujiwara, Yasuo Furushima, Takafumi Kasaya, Masaru Kawato, Shinji Tsuchida, Shuichi Watanabe, Hiroyuki Yamamoto, Hiroshi Kitazato. Distribution and temporal dynamics of the brittle star population in the continental slope off Sanriku, Northeast Japan: before-after the earthquake and selection of important area. 14th Deep-Sea Biology Symposium, 2015
  • Lindsay, Umetsu, Grossmann, Collins, Bentlage, Miyake, Hunt, Yamamoto. The narcomedusan fauna of the Japan Trench. 8th Hydrozoan Society Workshop (Ischia, Italy), 2015
  • 熊谷 英憲, 高井 研, 久保 雄介, 斎藤 実篤, 野崎 達生, 山本 啓之, 山崎 徹, 鈴木 勝彦, CK14-04 航海乗船者一同. SIP「次世代海洋資源調査技術」成因研究としての伊平屋北海丘掘削. 日本地球惑星科学連合2015年大会, 2015
  • 熊谷英憲・高井研・久保雄介・斎藤実篤・野崎達生・山本啓之，山崎徹, 鈴木勝彦, CK14-04乗船者一同. SIP「次世代海洋資源調査技術」成因研究としての伊平屋北海丘掘削. 日本地球惑星科学連合2015年大会, 2015
  • 土屋正史，豊福高志，植松勝之，Brüchert,Volker，Collen,John，山本啓之，北里 洋. 底生有孔虫Virgulinella fragilisの貧酸素環境への適応戦略. 日本古生物学会164回例会（豊橋市・豊橋市自然史博物館）, 2015
  • Metazoan environmental DNA as a tool in deep-sea environmental impact assessment. World Conference on Marine Biodiversity, 2014
  • Potentials and challenges on the use of environmental DNA to reconstruct deep-sea ecosphere and environmental changes.. Japan Geoscience Union Meeting, 2014
  • Dhugal Lindsay, Mitsuko Umetsu, Takayuki Uemura, Shojiro Ishibashi, Hiroshi Yoshida, Jun Nishikawa, James Reimer, James Hunt, Mary Grossmann, Hiroki Kise, Akihito Omori, Hisanori Kohtsuka, Michiyo Kawabata, Yuuichi Tsuchiya, Hiroyuki Yamamoto, Katsunori Fujikura, Tadashi Maruyama. Multicamera, multiformat video for multiple uses: insights from the PICASSO Project. Marine Imaging Workshop, 2014
  • Environmental DNA for identifying and monitoring protected areas. VentBase Meeting, 2014
  • 中嶋亮太, 山北剛久，渡部裕美，藤倉克則，田中克彦，山本啓之, 白山義久. 日本周辺の深海化学合成生態系におけるマクロ・メガベントスの種数および群集構造：重要海域選定の試み. 2013年度プランクトンベントス学会合同大会, 2013, p. 82-82
  • F. SinnigerHarii, H. Watanabe, S. Harii, Hiroyuki Yamamoto. Exploration and characterisation of hydrothermal vent communities using ultrasequencing of environmental DNA.. 5th International Symposium on Chemosynthesis-Based Ecosystems, 2013
  • Takehisa Yamakita ,Yuka Yokoyama, Hiroyuki. Yamamoto, Izumi Sakamoto, Takafumi Kasaya , Hiroshi. Kitazato. Marine Ecosystem Monitoring in Tohoku, Japan after the Tsunami 2011. 2013 Esri International User Conference Paper Sessions, 2013
  • 中嶋亮太, 山北剛久，渡部裕美，藤倉克則，田中克彦，山本啓之, 白山義久. 日本周辺の深海化学合成生態系における重要海域選定の試み. 2013年度日本海洋学会春季大会, 2013, p. 176-176
  • OBIS日本ノードの設立と今後の展望. ブルーアース2013, 2013
  • 田中 克彦, 窪寺 恒己, 佐々木 猛智, 佐藤 直人 , 白山 義久 , 杉崎 宏哉 , 勢田 明大 , 園田 朗 , 華房 康憲, 菱木 美和, 藤倉 克則 , 古島 靖夫 , 丸山 正 , 山本 啓之. OBIS日本ノードの設立と今後の展望. ブルーアース2013, 2013
  • Dhugal Lindsay, Hiroshi Yoshida, Shojiro Ishibashi, Mitsuko Umetsu, Atsushi Yamaguchi, Hiroyuki Yamamoto, Jun Nishikawa, James Davis Reimer, Hiromi Watanabe, Katsunori Fujikura, Tadashi Maruyama. The uROV PICASSO, the Visual Plankton Recorder, and other attempts to image plankton. International Symposium on Underwater Technology 2013, 2013
  • N Ohkouchi, Chikaraishi Y, Ogawa N O, Tsuchiya M, Yoshida T, Lindsay D J, Fujiwara Y, Kitamura M, Yamamoto H, Fujikura K. Is chemosynthetic community 100% supported by nitrogen from subseafloor? Applications of nitrogen isotopic composition of amino acids to the chemosynthetic ecosystem. AGU Ocean Science Meeting, 2012.2.23. Salt Lake City, 2012
  • Yukari Yoshida, Takuro Nunoura, Hiromi Kazama, Takuroh Noguchi, Hironori Akashi, Toshiro Yamanaka, Masahiro Yamamoto, Yasuo Furushima, Yuichiro Ueno, Hiroyuki Yamamoto, Ken Takai. Spatial distribution of viruses associated with planktonic and adhesive microbial communities in hydrothermal environments. Aquatic Virus Workshop 6, 2011
  • Masashi Tsuchiya,Takashi Toyofuku(JAMSTEC) , Petra Heinz(Tuebingen University) , John Collen(Victoria University of Wellington) , Volker Bruchert(Stockholm University) , Christoph Hemleben(Tuebingen Univeristy) , Vera Hemleben(Tuebingen Univeristy) , Hiroyuki Yamamoto(JAMSTEC) , Hiroshi Kitazato(JAMSTEC). Survival strategy of benthic foraminifera in dysoxic environments: distribution, cytological and genetic characteristics of Virgulinella fragilis. The 33rd International Geological Congress, Oslo, Norway, 2008
  • Masashi Tsuchiya, Takashi Toyofuku, Petra Heinz, John Collen, Volker Bruchert, Christoph Hemleben, Vera Hemleben,Hiroyuki Yamamoto,Hiroshi Kitazato. Survival strategy of benthic foraminifera in dysoxic environments: distribution, cytological and genetic characteristics of Virgulinella fragilis.. The 33rd International Geological Congress 2008, 2008
  • Masashi Tsuchiya, Takashi Toyofuku, John Collen, Hiroyuki Yamamoto, Hiroshi Kitazato. 底生有孔虫Virgulinellafragilisとその細胞内内生生物との関係に注目した貧酸素環境における底生有孔虫類の生存戦略:過去の 貧酸素環境が生物進化に与える影響. 第6回有孔虫研究会/MRC研究発表会, 2008
  • 山本 啓之. Distribution of Planktonic Bacteria and Biogeochemical Profiles in Hatoma Hydrothermal Vent Field. Joint Meeting of International Society for Microbial Ecology Asia 2007 and 23rd Annual Meeting of Japanese Society of Microbial Ecology, 2007
  • 豊福 高志 , 山本 啓之 , 北里 洋. 蛍光指示薬Fluo-3AMを用いた有孔虫細胞内カルシウムイオンの可視化. 日本古生物学会2007年年会, 2007
  • Masashi Tsuchiya, Takashi Toyofuku, Kiyotaka Takishita, Hiroyuki Yamamoto, John Collen, Hiroshi Kitazato. Molecular characterization of bacteria and kleptoplast within Virgulinella fragilis. International Symposium on Foraminifera 2006 (FORAMS 2006), 2006
  • Tsuchiya Masahi, Kiyotaka Takishita, Takashi Toyofuku, Kazumasa Oguri, Hiroyuki Yamamoto, Hiroshi Kitazato. 細胞内生生物との関係に注目した貧酸素環境における底生有孔虫Virgulinella fragilisの生存戦略:過去の嫌気環境が有孔虫進化に与える影響. 日本古生物学会2005年年会, 2005

ポスター発表（JAMSTECでの成果）

  • Do different trenches share communities? Hadal diversity viewed through environmental DNA. World Conference on Marine Biodiversity, 2015
  • Environmental DNA survey of metazoan biodiversity: A case study in hydrothermal vent sediments. International Symposium on Unraveling Biodiversity from DNA - From the Management of Databases to the Use of Next Generation Sequencers -, 2015
  • Identification of Ecologically or Biologically Significant Areas (EBSAs) in Japan-Southeast Asia Region and Comparison with Established Marine Protected Areas. The 8th GEOSS Asia-Pacific Symposium, 2015
  • Sinniger Frederic (JAMSTEC)・Oshima Kenshiro (Tokyo U.)・Harii Saki (U. of the Ryukyus) ・Takami Hideto (JAMSTEC)・Yamamoto Hiroyuki. Hydrothermal vent meiobenthos diversity viewed through high-throughput sequencing of sedimentary DNA. Blue Earth Symposium 2015, 2015
  • 兜森椋1, 坂田利江1, 岡野恵子1, 竹村明洋2, 三輪哲也3, 山本啓之3, 保智己4, 岡野俊行1 1 早稲田大学 先進理工 電生; 2 琉球大学 理学部 海洋自然科学科; 3 海洋技術開発機構; 4 奈良女子大学 理学部 化学生命環境学科. 深海性魚類バラビクニン及びザラビクニンロドプシンの分光解析. 第67回日本動物学会関東支部会, 2015
  • Hiroyuki Yamamoto, Dhugal Lindsay, Masashi Tsuchiya, Michinari Sunamura, Toshiro Yamanaka. Chemosynthetic production and trophic structure of deep-sea hydrothermal ecosystem. 環境微生物系学会合同大会2014, 2014
  • Takehisa Yamakita, Hiroyuki Yamamoto, Masahiro Nakaoka, Hiroya Yamano, Katsunori Fujikura, Kiyotaka Hidaka, Yuichi Hirota, Tadafumi Ichikawa, Shigeho Kakehi, Takahiko Kameda, Satoshi Kitajima, Kazuhiro Kogure, Teruhisa Komatsu, Naoki H. Kumagai, Hiroomi Miyamoto, Kazushi Miyashita, Haruyuki Morimoto, Ryota Nakajima, Syuhei Nishida, Kou Nishiuchi, Shingo Sakamoto, Masayoshi Sano, Kenji Sudo, Hiroya Sugisaki,Kazuaki Tadokoro, Katsuhiko Tanaka, Yoshie Uchifune-Jintsu, Kentaro Watanabe, Hiromi Watanabe, Yumiko Yara, Norishige Yotsukura, Yoshihisa Shirayama. Establishment of a protocol for selecting ecologically and biologically significant areas using case studies in Japan.. 3rd World Conference on Marine Biodiversity, 2014
  • Yoshie Jintsu-Uchifune, Kenji Sudo, Takehisa Yamakita, Hiroyuki Yamamoto and Yoshihisa Shirayama. Identification of Ecologically or Biologically Significant Areas in Japan-Southeast Asia Region and Comparison with Established Marine Protected Areas. World Conference on Marine Biology 2014, 2014, p. 219 (PS4-10)
  • Hiroyuki Yamamoto, Masahiro Nakaoka, Hiroya Yamano, Teruhisa Komatsu, Kazuaki Tadokoro, Hiroya Sugisaki, Katsunori Fujikura, Yoshihisa Shirayama. Strategic research project (S-9-5) for integrative observation and assessments of marine biodiversity in Asia-Pacific region, and contribution to conservation planning. 3rd World Conference on Marine Biodiversity, 2014
  • 山北剛久，山本 啓之 （JAMSTEC/TEAMS），伊勢 紀 （地域環境計画），北里 洋 （JAMSTEC/TEAMS）. 多数の環境データを用いた海域環境の区分手法の検討：東北地方太平洋沖を中心に. 日本生態学会第61回全国大会 講演要旨集, 2014, p. PB3-071
  • Frederic SinnigerHarii, Hiroyuki Yamamoto, Saki Harii, Kenshiro Ohshima, Motohiro Shimanaga, Hideto Takami. Metazoan communities in hydrothermal vent sediments: a case study on deep-sea metageneics. Ocean Science Meeting 2014, 2014
  • SinnigerHarii F, Ohshima K, Harii S, Shimanaga Motohiro, Takami H, Yamamoto Hiroyuki. Metazoan communities in deep-sea sediments around Japan: a case study on deep-sea metagenetics. Blue Earth Symposium 2014, 2014
  • 中嶋亮太, 山北剛久，渡部裕美，藤倉克則，田中克彦，山本啓之, 小椋徹也. 潜水調査船の映像データを用いたベントス個体数の定量評価. ブルーアース2014, 2014, p. 115-115
  • Yoshie Uchifune, Kenji Sudo, Hiroyuki Yamamoto, and Yoshihisa Shirayama. Ecologically or Biologically Significant Areas (EBSAs) in the marine environments of Asia region - Candidates identification using the data archives of marine biodiversity project. The First Asia Parks Congress, 2013, p. B087-B087
  • Integration of the marine biodiversity information around Japan-making a baseline for the design and management of natural parks/protected areas-.. The First Asia Parks Congress, 2013
  • Takehisa Yamakita, Naoki Kumagai, Hiroomi Miyamoto, Shingo Sakamoto, Hiroyuki Yamamoto, Teruhisa Komatsu, Shuhei Nisida , Kazuhiro Kogure, Hiroshi Kitazato. Species distribution models off the Tohoku area as a potential of recovery from tsunami impact. The First Asia Parks Congress, 2013
  • 山北剛久・山本啓之・北里 洋. 海況・生物・瓦礫データのGISへの統合と海域評価マップに向けての課題. 東北マリンサイエンス全体会議, 2013
  • 安定同位体分析から見た熱水活動域プランクトン群集の栄養段階の構造. 日本地球惑星科学連合2013年大会, 2013
  • Frederic SinnigerHarii, Hiromi WATANABE, Hiroyuki Yamamoto. How can environmental DNA help understanding chemosynthetic communities evolution and ecology?. Japan Geoscience Union Meeting 2013, 2013
  • Hiroyuki Yamamoto, Dhugal J. Lindsay, Masashi Tsuchiya, Michinari Sunamura. Trophic structure of planktonic community in hydrothermal vent field based on stable iso- topes. Japan Geoscience Union Meeting 2013, 2013
  • Hiroyuki Yamamoto, Yoshie Uchifune, Katsuhiko Tanaka, Ryota Nakajima, Katsunori Fujikura, Yoshihisa Shirayama. Data integration system for marine biodiversity assessment and EBSA identification. International Symposium and Workshop for Biodiversity in Changing Coastal Waters of Tropical and Subtropical Asia, 2012
  • Uchifune,Y., K. Sudo, H. Yamamoto and Y. Shirayama. Preliminary results of marine biodiversity analyses for Asia region using data archives.. Biodiversity in Changing Coastal Waters of Tropical and Subtropical Asia, International Symposium, 2012, p. 31-31
  • Takehisa Yamakita, Takafumi Kasaya, Hiroyuki Yamamoto, Hiroshi Kitazato, Yuka Yokoyama, Izumi Sakamoto. Monitoring and Assessment of Marine Ecosystem in Tohoku Region after the Tsunami 2011. International Symposium on Emerging issues after the 2011 Tohoku Earthquake, 2012
  • New framework and data system to integrate the marine biodiversity information around Japan. 日本学術会議主催学術フォーラム「データと発見」, 2012
  • New framework to integrate distributional records of marine organisms around Japan. 日本地球惑星科学連合2012年度連合大会, 2012
  • Katsuhiko Tanaka, Katsunori Fujikura, Hiroyuki Yamamoto, Aska Vanroosebeke, Saito Hideaki, Akira Sonoda, Tadashi Maruyama. Developing a new data system, the Biological Information System for Marine life, to integrate marine biodiversity in the adjacent waters of Japan.. World Conference on Marine Biodiversity, 2011
  • Tsuchiya M, Toyofuku T, Uematsu K, Bruchert V, Collen J, Yamamoto H, Kitazato H. Multiple endobionts of both bacteria and kleptoplast in Virgulinella fragilis (foraminifera): distribution, cytological and genetic characteristics. Memorial Symposium for the 26th International Prize for Biology, 2010
  • 山本啓之、北里洋、豊福高志、野牧秀隆、小川奈々子、植松勝之、小栗一将、土屋正志. 原始的な単細胞真核生物Gromiaの生態・共生・進化. 日本地球惑星科学連合2009年大会（幕張）, 2009
  • Hiroyuki Yamamaoto,Tomoko Maruyama (Shizuoka University), Laszlo G. Toth (Shizuoka University) , Kenji Kato (Shizuoka University) , Naoto Tair(University of Ryukyu) , Jun-Ichiro Ishibashi (Kyushu University ) , Kiminori Shitashima (Central Research Institute of Electric Power Industry). Chemosynthesis-based Community and Biogeochemical Profiles in Hatoma Hydrothermal Vent Field of Southern Okinawa Trough, Japan. 7th International Symposium for Subsurface Microbiology, 2008
  • Masashi Tsuchiya,Takashi Toyofuku(JAMSTEC) , Kiyotaka Takishita(JAMSTEC) , Hiroyuki Yamamoto(JAMSTEC) , John Collen(Victoria University of Wellington) , Hiroshi Kitazato(JAMSTEC). Molecular characterization of bacteria and kleptoplast within Virgulinella fragilis.. FORAMS 2006, 2006