JAMSTEC > JAMSTEC Researchers Database > Katsunori Fujikura

JAMSTEC Researchers Database

  • Katsunori Fujikura
Department
Research Institute for Global Change (RIGC)　Marine Biodiversity and Environmental Assessment Research Center (BioEnv)　Director
Other
General Project Team for K-program　Development of Smart Sensing System Project Team　Deputy Director
Career
Principal Researcher

Profile

Speciality

Research Achievement

Peer reviewed publications (Belonging to JAMSTEC)

  • Masashi Tsuchiya, Tomo Kitahashi, Ryota Nakajima, Kazumasa Oguri, Kiichiro Kawamura, Akimu Nakamura, Kengo Nakano, Yosaku Maeda, Masafumi Murayama, Sanae Chiba, Katsunori Fujikura. Distribution of microplastics in bathyal- to hadal-depth sediments and transport process along the deep-sea canyon and the Kuroshio Extension in the Northwest Pacific. MARINE POLLUTION BULLETIN, 2023, doi: 10.1016/j.marpolbul.2023.115466
  • Akihiro Tame,Tadashi Maruyama,Tetsuro Ikuta,Yoshihito Chikaraishi,Nanako O. Ogawa,Masashi Tsuchiya,Kiyotaka Takishita,Miwako Tsuda,Miho Hirai,Yoshihiro Takaki,Naohiko Ohkouchi,Katsunori Fujikura,Takao Yoshida. mTORC1 regulates phagosome digestion of symbiotic bacteria for intracellular nutritional symbiosis in a deep-sea mussel. Science Advances, 2023, 9, 34, p. eadg8364, doi: 10.1126/sciadv.adg8364
  • Masahide Wakita, Shuichi Watanabe, Jun Yoshino, Kazumasa Oguri, Hidetaka Nomaki, Shinsuke Kawagucci, Keisuke Ariyoshi, Akira Nagano & Katsunori Fujikura. Deep-sea bottom-water environment change caused by sediment resuspension on the continental slope off Sanriku, Japan, before and after the 2011 Tohoku Earthquake. Progress in Earth and Planetary Science, 2022, 9, 56, doi: 10.1186/s40645-022-00515-1
  • Nakajima R, T. Miyama, T. Kitahashi, N. Isobe, Y. Nagano, T. Ikuta, K. Oguri, M. Tsuchiya, T. Yoshida, K. Aoki, Y. Maeda, K. Kawamura, M. Suzukawa, T. Yamauchi, H. Heather, K. Fujikura, A. Yabuki. Plastic after an extreme storm: The typhoon-induced response of micro- and mesoplastics in coastal waters. Frontiers in marine science, 2022, 8, p. 806952, doi: 10.3389/fmars.2021.806952
  • Tetsuro Ikuta, Ryota Nakajima, Masashi Tsuchiya, Sanae Chiba, Katsunori Fujikura. Interdecadal distribution of persistent organic pollutants in deep-sea chemosynthetic bivalves. Frontiers in marine science, 2021, 8, p. 751848, doi: 10.3389/fmars.2021.751848
  • Sakiko Orui Sakaguchi, Tetsuro Ikuta, Akihiro Tame, Yuichi Shimizu, Kiyotaka Takishita, Yuriko Nagano, Hiroaki Kasai, Katsunori Fujikura. Infection of oomycetes and bacteria associated with their specific colocalization in chum salmon eggs. AQUACULTURE, 2021, 546, doi: 10.1016/j.aquaculture.2021.737244
  • Ishikawa, N.F., Ogawa, N.O., Chikaraishi, Y., Yamaguchi, M., Fujikura, K., Miyairi, Y., Yokoyama, Y., Nagata, T. and Ohkouchi, N.. Influences of Ocean Currents on the Diets of Demersal Fish Communities in the Western North Pacific Revealed by Their Muscle Carbon and Nitrogen Isotopic Compositions. Frontiers in marine science, 2021, 8, doi: 10.3389/fmars.2021.641282
  • Tomo Kitahashi, Ryota Nakajima, Hidetaka Nomaki, Masashi Tsuchiya, Akinori Yabuki, Sojiro Yamaguchi, Chunmao Zhu, Yugo Kanaya, Dhugal J. Lindsay, Sanae Chib, and Katsunori Fujikura. Development of robust models for rapid classification of microplastic polymer types based on near infrared hyperspectral images. Analytical Methods, 2021, 13, p. 2215-2222, doi: 10.1039/D1AY00110H
  • Kitahashi T., Nakajima R., Nomaki H., Tsuchiya M., Yabuki A., Yamaguchi S., Zhu C., Kanaya Y., Lindsay D.J., Chiba S., Fujikura K.. Development of robust models for rapid classification of microplastic polymer types based on near infrared hyperspectral images. Analytical Methods, 2021, 13, p. 2215-2222, doi: 10.1039/D1AY00110H
  • Kanae Igawa-Ueda, Tetsuro Ikuta (co-first author), Akihiro Tame, Katsushi Yamaguchi, Shuji Shigenobu, Yuki Hongo, Yoshihiro Takaki, Katsunori Fujikura, Tadashi Maruyama, Takao Yoshida. Symbiont transmission onto the cell surface of early oocytes in the deep-sea clam, Phreagena okutanii. ZOOLOGICAL SCIENCE, 2021, 38, 2, p. 140-147, doi: 10.2108/zs200129
  • Chunmao Zhu, Yugo Kanaya, Masashi Tsuchiya, Ryota Nakajima, Hidetaka Nomaki, Tomo Kitahashi, Katsunori Fujikura. Optimization of hyperspectral imaging system for rapid detection of microplastics down to 100 µm. MethodsX, 2020, 8, 101175, doi: 10.1016/j.mex.2020.101175
  • Yuriko Nagano, Toshiko Miura, Taishi Tsubouchi, Andre O. Lima, Masaru Kawato, Yoshihiro Fujiwara and Katsunori Fujikura. Cryptic fungal diversity revealed in deep-sea sediments associated with whale-fall chemosynthetic ecosystems. Mycology, 2020, 11, 3, p. 263-278, doi: 10.1080/21501203.2020.1799879
  • Misako Matsuba; Yusuke Tanaka; Takehisa Yamakita; Yoichi Ishikawa; Katsunori Fujikura. Estimation of tsunami debris on seafloors towards future disaster preparedness: Unveiling spatial varying effects of combined land use and oceanographic factors. MARINE POLLUTION BULLETIN, 2020, 157, doi: 10.1016/j.marpolbul.2020.111289
  • Nakajima R, Tsuchiya M, Yabuki A, Masuda S, Kitahashi T, Nagano Y, IKuta T, Isobe N, Nakata H, Ritchie H, Oguri K, Osafune S, Kawamura K, Suzukawa M, Yamauchi T, Iijima K, Yoshida T, Chiba S, Fujikura K. Massive occurrence of benthic plastic debris at the abyssal seafloor beneath the Kuroshio Extension, the North West Pacific. MARINE POLLUTION BULLETIN, 2020, 166, p. 112188-112188, doi: 10.1016/j.marpolbul.2021.112188
  • Chunmao Zhu,Yugo Kanaya,Ryota Nakajima,Masashi Tsuchiya,Hidetaka Nomaki,Tomo Kitahashi,Katsunori Fujikura. Characterization of microplastics on filter substrates based on hyperspectral imaging: Laboratory assessments. ENVIRONMENTAL POLLUTION, 2020, 263PB, doi: 10.1016/j.envpol.2020.114296
  • Luciano Lopes Queiroz, Amanda Gonçalves Bendia, Rubens Tadeu Delgado Duarte, Diego Assis das Graças, Artur Luiz da Costa da Silva, Cristina Rossi Nakayama, Paulo Yukio Sumida, Andre O. S. Lima, Yuriko Nagano, Katsunori Fujikura, Hiroshi Kitazato & Vivian Helena Pellizari. Bacterial diversity in deep-sea sediments under influence of asphalt seep at the São Paulo Plateau. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2020, 113, p. 707-717, doi: 10.1007/s10482-020-01384-8
  • Masashi Tsuchiya, Hidetaka Nomaki, Tomo Kitahashi, Ryota Nakajima, Katsunori Fujikura. Sediment sampling with a core sampler equipped with aluminum tubes and an onboard processing protocol to avoid plastic contamination. MethodsX, 2019, 6, p. 2662-2668, doi: 10.1016/j.mex.2019.10.027
  • Tsujimoto A, Nomura R, Arai K, Nomaki H, Inoue M, Fujikura K. Changes in deep-sea benthic foraminiferal fauna caused by turbidites deposited after the 2011 Tohoku-oki earthquake. MARINE GEOLOGY, 2019, 419, doi: 10.1016/j.margeo.2019.106045
  • Ryota Nakajima, Masashi Tsuchiya, Dhugal J. Lindsay, Tomo Kitahashi, Katsunori Fujikura and Tomohiko Fukushima. A new small device made of glass for separating microplastics from marine and freshwater sediments. PeerJ, 2019, 7, doi: 10.7717/peerj.7915
  • Tetsuro Ikuta, Akihiro Tame, Masaki Saito, Yui Aoki, Yukiko Nagai, Makoto Sugimura, Koji Inoue, Katsunori Fujikura, Kazue Ohishi, Tadashi Maruyama,Takao Yoshida. Identification of cells expressing two peptidoglycan recognition proteins in the gill of the vent mussel, Bathymodiolus septemdierum. FISH & SHELLFISH IMMUNOLOGY, 2019, 93, p. 815-822, doi: 10.1016/j.fsi.2019.08.022
  • Nakajima R, Lindsay DJ, Tsuchiya M, Matsui R, Kitahashi T, Fujikura K, Fukushima T. A small, stainless-steel sieve optimized for laboratory beaker-based extraction of microplastics from environmental samples. MethodsX, 2019, 6, p. 1677-1682, doi: 10.1016/j.mex.2019.07.012
  • Sakiko Orui Sakaguchi & Gen Ogawa & Hiroaki Kasai & Yuichi Shimizu & Hiroshi Kitazato & Katsunori Fujikura & Kiyotaka Takishita. Molecular identification of water molds (oomycetes) associated with chum salmon eggs from hatcheries in Japan and possible sources of their infection. AQUACULTURE INTERNATIONAL, 2019, 27, doi: 10.1007/s10499-019-00427-w
  • Yuriko Nagano,Yoshihiro Fujiwara, Atsushi Nishimoto, Takuma Haga, Katsunori Fujikura. Deep-sea endemic fungi? The discovery of Alisea longicolla from artificially immersed wood in deep sea off the Nansei Islands, Japan. MYCOSCIENCE, 2019, 60, 4, p. 228-231, doi: 10.1016/j.myc.2019.03.004
  • Yuki Hongo, Akinori Yabuki, Katsunori Fujikura, Satoshi Nagai. Genes functioned in kleptoplastids of Dinophysis are derived from haptophytes rather than from cryptophytes. Scientific Reports, 2019, 9, doi: 10.1038/s41598-019-45326-5
  • Hiromi Kayama Watanabe, Shuichi Shigeno, Katsunori Fujikura, Takaaki Matsui, Shogo Kato, Hiroyuki Yamamoto. Faunal composition of deep-sea hydrothermal vent fields on the Izu-Bonin-Mariana Arc, northwestern Pacific. DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS, 2019, 149, doi: 10.1016/j.dsr.2019.05.010
  • 伊勢戸徹， 齋藤暢之， 一柳麻里香， 森岡美樹， 細野隆史， 土田真二， 北山智暁，佐々木朋樹， 齋藤秀亮， 久積正具， 佐藤孝子， 藤倉克則， 園田朗， 華房康憲. JAMSTECの生物サンプル共同管理体制と利用機会の拡大. JAMSTEC Report of Research and Development, 2019, 28, p. 43-53, doi: 10.5918/jamstecr.28.43
  • Ryota Nakajima　Chong Chen　Ryoichi Iwase　Hiroyuki Yamamoto　Katsunori Fujikura. Clams after storms: the impact of multiple disturbances on seep vesicomyid clams revealed by long-term monitoring. MARINE BIOLOGY, 2019, 166, 3, doi: 10.1007/s00227-019-3484-6
  • Akinori Yabuki, Yangtsho Gyaltshen, Aaron A. Heiss, Katsunori Fujikura, Eunsoo Kim. Ophirina amphinema n. gen., n. sp., a New Deeply Branching Discobid with Phylogenetic Affinity to Jakobids. Scientific Reports, 2018, 8, doi: 10.1038/s41598-018-34504-6
  • Ogura T, Watanabe HK, Chen C, Sasaki T, Kojima S, Ishibashi J, Fujikura K. Population history of deep-sea vent and seep Provanna snails (Mollusca: Abyssochrysoidea) in the northwestern Pacific. PeerJ, 2018, 6, doi: 10.7717/peerj.5673
  • 小川 奈々子, 大河内 直彦, 野牧 秀隆, 力石 嘉人, 藤倉 克則, 北里 洋. 2011年東北地方太平洋沖地震後に採取された生物および堆積物中のポリ塩化ビフェニル（PCB）. NIPPON SUISAN GAKKAISHI, 2018, 84, 5, p. 897-900, doi: 10.2331/suisan.WA2566-5
  • 小栗一将、渡邉修一、脇田昌英、藤原義弘、土田真二、河戸　勝、藤倉克則、北里　洋. 岩手県大槌・釜石沖合における海底環境の長期時系列観測. NIPPON SUISAN GAKKAISHI, 2018, 84, 5, p. 889-892, doi: 10.2331/suisan.WA2566-3
  • 藤原義弘，高橋幸愛，河西なつみ，笠谷貴史，山北剛久， 土田真二，河戸 勝，北里 洋，藤倉克則. 宮城県沖合底びき網漁業漁場清掃事業による瓦礫回収資料に基づく海底瓦礫の経年変化と分布. NIPPON SUISAN GAKKAISHI, 2018, 84, 5, p. 885-888, doi: 10.2331/suisan.WA2566-2
  • Hirotaka Matsuo, Kenichi Nonaka, Yuriko Nagano, Akinori Yabuki, Katsunori Fujikura, Yoko Takahashi, Satoshi Omura and Takuji Nakashima. New metabolites, sarcopodinols A and B, isolated from deep-sea derived fungal strain Sarcopodium sp. FKJ-0025. BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, 2018, 82, 8, p. 1323-1326, doi: 10.1080/09168451.2018.1467264
  • Konami Takahashi, Kazunari Sakai, Wataru Fukasawa, Yuriko Nagano, Sakiko Orui Sakaguchi, Andre O. Lima, Vivian H. Pellizari, Masato Iwatsuki, Kiyotaka Takishita, Takao Yoshida, Kenichi Nonaka, Katsunori Fujikura & Satoshi Omura. Quellenin, a new anti-Saprolegnia compound isolated from the deep-sea fungus, Aspergillus sp. YK-76. JOURNAL OF ANTIBIOTICS, 2018, 71, 8, p. 741-744, doi: 10.1038/s41429-018-0053-z
  • Hiromi Kayama Watanabe, Chong Chen, Daniel P. Marie, Ken Takai, Katsunori Fujikura, Benny K. K. Chan. Phylogeography of hydrothermal vent stalked barnacles: a new species fills a gap in the Indian Ocean ‘dispersal corridor’ hypothesis. Royal Society Open Science, 2018, 5, doi: 10.1098/rsos.172408
  • Chiba S, Saito H, Fletcher R, Yogi T, Kayo M, Miyagi S, Ogido M, Fujikura K. Human footprint in the abbyss: 30 year records of deep-sea plastic debris. MARINE POLICY, 2018, 96, p. 204-212, doi: 10.1016/j.marpol.2018.03.022
  • Watanabe, H. K., Chen, C., Marie, D. P., Takai, K., Fujikura, K., Chan, B. K. K.. Phylogeography of hydrothermal vent stalked barnacles: a new species fills a gap in the Indian Ocean ‘dispersal corridor’ hypothesis. Royal Society Open Science, 2018, 5, 4, doi: 10.1098/rsos.172408
  • Daria Tashyreva, Galina Prokopchuk, Akinori Yabuki, Binnypreet Kaur, Drahomira Faktorova, Jan Votypka, Chiho Kusaka, Katsunori Fujikura, Takashi Shiratori, Ken-Ichiro Ishida, Ales Horak, Julius Lukes. Phylogeny and morphology of new diplonemids from Japan. PROTIST, 2018, 169, 2, p. 158-179, doi: 10.1016/j.protis.2018.02.001
  • Takehisa Yamakita, Hiroyuki Yokooka, Yoshihiro Fujiwara, Masaru Kawato, Shinji Tsuchida, Syojiro Ishibashi, Tadayuki Kurokawa, Katsunori Fujikura. Image dataset of ophiuroid and other deep sea benthic organisms in 2015 extracted from the survey off Sanriku, Japan, by the research following the Great East Japan Earthquake 2011. ECOLOGICAL RESEARCH, 2018, 33, 2, p. 285-285, doi: 10.1007/s11284-018-1571-7
  • Tetsuro Ikuta, Makoto Sugimura, Suguru Nemoto, Yui Aoki, Akihiro Tame, Masahiro Yamamoto, Masaki Saito, Yoshiki Shimokawa, Tetsuya Miwa, Yukiko Nagai, Takao Yoshida, Katsunori Fujikura, Takashi Toyofuku. Effects of a long-term rearing system for deep-sea vesicomyid clams on host survival and endosymbiont retention. FISHERIES SCIENCE, 2017, doi: 10.1007/s12562-017-1149-2
  • Kevin C Wakeman, Akinori Yabuki, Katsunori Fujikura, Ko Tomikawa, Takeo Horiguchi. Molecular Phylogeny and Surface Morphology of Thiriotia hyperdolphinae n. sp. and Cephaloidophora oradareae n. sp. (Gregarinasina, Apicomplexa) Isolated from a Deep Sea Oradarea sp. (Amphipoda) in the West Pacific. JOURNAL OF EUKARYOTIC MICROBIOLOGY, 2017, 65, 3, p. 372-381, doi: 10.1111/jeu.12480
  • Genki Ozawa, Shigeru Shimamura, Yoshihiro Takaki, Kiyotaka Takishita, Tetsuro Ikuta, James P. Barry, Tadashi Maruyama, Katsunori Fujikura, Takao Yoshida. Ancient occasional host switching of maternally transmitted bacterial symbionts of chemosynthetic vesicomyid clams. Genome Biology and Evolution, 2017, 9, 9, p. 2226-2236, doi: doi:10.1093/gbe/evx166
  • Sakiko Orui Sakaguchi, Tetsuro Ikuta, Gen Ogawa, Kodai Yamane, Naonobu Shiga, Hiroshi Kitazato, Katsunori Fujikura, Kiyotaka Takishita. Morphological identity of a taxonomically unassigned COI sequence detected using PCR from stomach contents of juvenile chum salmon. FISHERIES SCIENCE, 2017, doi: 10.1007/s12562-017-1106-0
  • Konami Takahashi, Kazunari Sakai, Yuriko Nagano, Sakiko Orui Sakaguchi, Andre O Lima, Vivian H Pellizari, Masato Iwatsuki, Kiyotaka Takishita, Kenichi Nonaka, Katsunori Fujikura and Satoshi Omura. Cladomarine, a new anti-saprolegniasis compound isolated from the deep-sea fungus, Penicillium coralligerum YK-247. JOURNAL OF ANTIBIOTICS, 2017, 70, 8, p. 911-914, doi: 10.1038/ja.2017.58
  • Yuriko Nagano, Toshiko Miura, Shinro Nishi, Andre O Lima, Cristina Nakayama, Vivian H Pellizari, Katsunori Fujikura. Fungal diversity in deep-sea sediments associated with asphalt seeps at the Sao Paulo Plateau. DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY, 2017, 146, p. 59-67, doi: 10.1016/j.dsr2.2017.05.012
  • Takishita K., Takaki Y., Chikaraishi Y., Ikuta T., Ozawa G., Yoshida T., Ohkouchi N., Fujikura. Genomic evidence that methanotrophic endosymbionts provide deep-sea Bathymodiolus mussels with a sterol intermediate in cholesterol biosynthesis. Genome Biology and Evolution, 2017, 9, 5, p. 1148-1160, doi: doi: 10.1093/gbe/evx082.
  • Shigeru Shimamura,Takashi Kaneko,Genki Ozawa,Mamiko Nishino Matsumoto,Takeru Koshiishi,Yoshihiro Takaki,Chiaki Kato,Ken Takai,Takao Yoshida,Katsunori Fujikura,James P. Barry,Tadashi Maruyama. Loss of genes related to Nucleotide Excision Repair (NER) and implications for reductive genome evolution in symbionts of deep-sea vesicomyid clams. PLoS ONE, 2017, 12, 2, doi: doi:10.1371/journal.pone.0171274
  • Genki Ozawaa, Shigeru Shimamura, Yoshihiro Takaki, Shin-ichi Yokobori, Yasuhiko Ohara, Kiyotaka Takishita, Tadashi Maruyama, Katsunori Fujikura, Takao Yoshida. Updated mitochondrial phylogeny of Pteriomorph and Heterodont Bivalvia, including deep-sea chemosymbiotic Bathymodiolus mussels, vesicomyid clams and the thyasirid clam Conchocele cf. bisecta. Marine Genomics, 2017, 31, p. 43-52, doi: 10.1016/j.margen.2016.09.003
  • Sakiko Orui Sakaguchi, Shigeru Shimamura, Yuichi Shimizu, Gen Ogawa, Yuichiro Yamada, Keiko Shimizu, Hiroaki Kasai, Hiroshi Kitazato, Yoshihiro Fujiwara, Katsunori Fujikura, Kiyotaka Takishita. Comparison of morphological and DNA-based techniques for stomach content analyses in juvenile chum salmon Oncorhynchus keta: a case study on diet richness of juvenile fishes. Fisheries Science, 2016, 83, 1, p. 47-56, doi: DOI: 10.1007/s12562-016-1040-6
  • Hiromi Watanabe, Takuya Yahagi, Yukiko Nagai, MiHye Seo, Shigeaki Kojima, Jun-ichiro Ishibashi, Hiroyuki Yamamoto, Katsunori Fujikura, Satoshi Mitarai, Takashi Toyofuku. Different thermal preferences for brooding and larval dispersal of two neighboring shrimps in deep-sea hydrothermal vent fields. Marine Ecology-An Evolutionary Perspective, 2016, 37, 6, p. 1282-1289, doi: 10.1111/maec.12318
  • Akinori Yabuki, Goro Tanifuji, Chiho Kusaka, Kiyotaka Takishita, Katsunori Fujikura. Hyper-eccentric structural genes in the mitochondrial genome of the algal parasite Hemistasia phaeocysticola. Genome Biology and Evolution, 2016, doi: https://doi.org/10.1093/gbe/evw207
  • Ohkouchi, N., Shibata, H., Chikaraishi, Y., Nomaki, N., Ogawa, N.O., Nagata, T., Goto, T., Fujikura, K., and Kitazato, H.. A monitoring result of polychlorinated biphenyls (PCBs) in deep-sea organisms and sediments off Tohoku during 2012-2014: temporal variation and the relationship with the trophic position. Journal of Oceanography, 2016, 72, 4, p. 629-639, doi: 10.1007/s10872-016-0359-z
  • Tetsuro Ikuta, Kanae Igawa, Akihiro Tame, Tsuneyoshi Kuroiwa, Haruko Kuroiwa, Yui Aoki, Yoshihiro Takaki, Yukiko Nagai, Genki Ozawa, Masahiro Yamamoto, Ryusaku Deguchi, Katsunori Fujikura, Tadashi Maruyama, Takao Yoshida. Surfing the vegetal pole in a small population: extracellular vertical transmission of an 'intracellular' deep-sea clam symbiont. Royal Society Open Science, 2016, doi: 10.1098/rsos.160130
  • Nomaki H, Mochizuki T, Kitahashi T, Nunoura T, Arai K, Toyofuku T, Tanaka G, Shigeno S, Tasumi E, Fujikura K, Watanabe S. Effects of mass sedimentation event after the 2011 off the Pacific coast of Tohoku Earthquake on benthic prokaryotes and meiofauna inhabiting the upper bathyal sediments.. JOURNAL OF OCEANOGRAPHY, 2016, 72, p. 113-128, doi: 10.1007/s10872-015-0293-5
  • Kazumasa Oguri, Yasuo Furushima, Takashi Toyofuku, Takafumi Kasaya, Masahide Wakita, Shuichi Watanabe, Katsunori Fujikura, Hiroshi Kitazato. Long-term monitoring of bottom environments of the continental slope off Otsuchi Bay, northeastern Japan. Journal of Oceanography, 2016, 72, 1, p. 151-166, doi: DOI 10.1007/s10872-015-0330-4
  • 後藤 慎平，藤倉 克則，藤原 義弘，土屋 利雄，清水 悦郎，布田 浩二. エアガン音源が遠距離を遊泳する海棲ほ乳動物に与える影響. 日本音響学会　2015年　秋季研究発表会講演論文集, 2015, p. 1207-1208
  • Fumiya Noguchia, Shigeru Shimamura, Takuro Nakayama, Euki Yazaki, Akinori Yabuki, Tetsuo Hashimoto, Yuji Inagaki, Katsunori Fujikura, Kiyotaka Takishita. Metabolic Capacity of Mitochondrion-related Organelles in the Free-living Anaerobic Stramenopile Cantina marsupialis.. Protist, 2015, 166, (5), p. 534-550, doi: 10.1016
  • Nakajima, R., Yamamoto, H., Kawagucci, S., Takaya, Y., Nozaki, T., Chen, C., Fujikura, K., Miwa, T., and Takai, K. Post-drilling changes in seabed landscape and megabenthos in a deep-sea hydrothermal system, the Iheya North field, Okinawa Trough. PLoS One, 2015, 10, 4, p. e0123095, doi: 10.1371/journal.pone.0123095
  • Nakajima, R., Yamamoto, H., Kawagucci, S., Takaya, Y., Nozaki, T., Chen, C., Fujikura, K., Miwa, T. and Takai, K.. Post-drilling changes in seabed landscape and megabenthos in a deep-sea hydrothermal system, the Iheya North field, Okinawa Trough. PLoS One, 2015, 10, 4, doi: 10.1371/journal.pone.0123095
  • Kitahashi T, Jenkins RG, Nomaki H, Shimanaga M, Fujikura K, Kojima S. Effect of the 2011 Tohoku Earthquake on deep-sea meiofaunal assemblages inhabiting the landward slope of the Japan Trench. Marine Geology, 2014, 358, p. 128-137
  • SHIGENO SHUICHI(Department of Marine Biodiversity Research) , Ogura Atsushi(Nagahama Institute BioSci Tech) , Mori Tsukasa(Nihon University) , Toyohara Haruhiko(Kyoto University) , YOSHIDA TAKAO(Department of Marine Biodiversity Research) , TSUCHIDA SHINJI(Department of Marine Biodiversity Research) , FUJIKURA KATSUNORI(Department of Marine Biodiversity Research). Sensing deep extreme environments: the receptor cell types, brain centers, and multi-layer neural packaging of hydrothermal vent endemic worms.. Frontiers in Zoology, 2014, 11, p. e82, doi: doi:10.1186/s12983-014-0082-9
  • ORUI SAKIKO(Project Team for Analyses of Changes in East Japan Marine Ecosystems) , TAKISHITA KIYOTAKA(Project Team for Analyses of Changes in East Japan Marine Ecosystems) , GOTOH TOMOAKI(Iwate Fisheries Technology Center) , SHIBATA HARUKA(Graduate School of Fisheries Sciences, Kitasato Un) , KOJIMA SHIGEAKI(Atmosphere and Ocean Research Institute, The Unive) , TSUCHIDA SHINJI(Project Team for Analyses of Changes in East Japan Marine Ecosystems) , KITAZATO HIROSHI(Project Team for Analyses of Changes in East Japan Marine Ecosystems) , FUJIKURA KATSUNORI(Project Team for Analyses of Changes in East Japan Marine Ecosystems). Analyses of age and population genetic structure of the broadbanded thornyhead Sebastolobus macrochir in North Japan suggest its broad dispersion and migration before settlement. Journal of Oceanography, 2014, 70, p. 457-462, doi: 10.1007/s10872-014-0240-x
  • Takehisa Yamakita, Hiroyuki Yamamoto, Masahiro Nakaoka, Hiroya Yamano, Katsunori Fujikura, Kiyotaka Hidaka, Yuichi Hirota, Tadafumi Ichikawa, Shigeho Kakehi, Takahiko Kameda, Satoshi Kitajima, Kazuhiro Kogure, Teruhisa Komatsu, Naoki H. Kumagai, Hiroomi Miyamoto, Kazushi Miyashita, Haruyuki Morimoto, Ryota Nakajima, Syuhei Nishida, Kou Nishiuchi, Shingo Sakamoto, Masayoshi Sano, Kenji Sudo, Hiroya Sugisaki,Kazuaki Tadokoro, Katsuhiko Tanaka, Yoshie Uchifune-Jintsu, Kentaro Watanabe, Hiromi Watanabe, Yumiko Yara, Norishige Yotsukura, Yoshihisa Shirayama. Identification of important marine areas around the Japanese Archipelago: Establishment of a protocol for evaluating a broad area using ecologically and biologically significant areas selection criteria. Marine Policy, 2014, 51, p. 136-147, doi: 10.1016/j.marpol.2014.07.009
  • Ryota Nakajima, Tetsuya Komuku, Takehisa Yamakita, Dhugal J. Lindsay, Yoshie Jintsu-Uchifune, Hiromi Watanabe, Katsuhiko Tanaka, Yoshihisa Shirayama, Hiroyuki Yamamoto, and Katsunori Fujikura. A new method for estimating the area of the seafloor from oblique images taken by deep-sea submersible survey platforms. JAMSTEC Report of Research and Development, 2014, 19, p. 59-66, doi: 10.5918/jamstecr.19.59
  • Masako Nakamura, Hiromi Watanabe, Takenori Sasaki, Junichiro Ishibashi, Katsunori Fujikura, Satoshi Mitarai. Life history traits of Lepetodrilus nux in the Okinawa Trough, based upon gametogenesis, shell size, and genetic variability. Marine Ecology Progress Series, 2014, 505, p. 119-130
  • 海洋生物情報の公開と応用展開. JAMSTEC Report of Research and Development, 2014, 18, p. 81-88
  • Ryota Nakajima, Takehisa Yamakita, Hiromi Watanabe, Katsunori Fujikura, Katsuhiko Tanaka, Hiroyuki Yamamoto, Yoshihisa Shirayama. Species richness and community structure of benthic macrofauna and megafauna in the deep-sea chemosynthetic ecosystems around the Japanese Archipelago: an attempt to identify priority areas for conservation. Diversity and Distributions, 2014, 20, p. 1160-1172
  • 田中克彦・新井隆弘・岸良武文・山内束・齋藤秀亮・華房康憲・園田朗・古島靖夫・山本啓之・藤倉克則・丸山正. 海洋生物情報の公開と応用展開. JAMSTEC-R, 2014, 18, p. 81-88
  • Kawagucci, S., Miyazaki, J., Nakajima, R., Nozaki, T., Takaya, Y., Kato, Y., Shibuya, T., Konno, U., Nakaguchi, Y., Hatada, K., Hirayama. H., Fujikura, K., Furushima, Y., Yamamoto, H., Watsuji, T., Ishibashi, J., Takai, K.. Post-drilling changes in fluid discharge pattern, mineral deposition, and fluid chemistry in the Iheya North hydrothermal field, Okinawa Trough. GEOCHEMISTRY GEOPHYSICS GEOSYSTEMS, 2013, 14, 11, p. 4774-4790, doi: 10.1002/2013GC004895
  • Yoshimitsu Nakamura, Masaaki Konishi, Kazue Ohishi, Chiho Kusaka, Akihiro Tame, Yuji Hatada, Katsunori Fujikura, Masatoshi Nakazawa, Masahiro Fujishima, Takao Yoshida, Tadashi Maruyama. Mucus glycoproteins selectively secreted from bacteriocytes in gill filaments of the deep-sea clam Calyptogena okutanii. Open Journal of Marine Science, 2013, 3, 4, p. 167-174, doi: 10.4236/ojms.2013.34019
  • KITAMURA MINORU , KUMAMOTO YUICHIRO , KAWAKAMI HAJIME , Cruz Eric C. , FUJIKURA KATSUNORI. Horizontal distribution of Fukushima-derived radiocesium in zooplankton in the northwestern Pacific Ocean. Biogeosciences, 2013, 10, p. 5729-5738
  • M Capa, E. Nishi, K. Tanaka, K. Fujikura. First record of a Bispira species (Sabellidae: Polychaeta) from a hydrothermal vent. Marine Biodiversity Records, 2013, 68, p. 1-6
  • Kazumasa Oguri, Kiichiro Kawamura, Arito Sakaguchi, Takashi Toyofuku, Takafumi Kasaya, Masafumi Murayama, Katsunori Fujikura, Ronnie N. Glud, Hiroshi Kitazato. Hadal disturbance in the Japan Trench induced by the 2011 Tohoku-Oki Earthquake. Scientific Reports, 2013, 3, doi: 10.1038/srep01915
  • Takeshi Tsuji, Kiichiro Kawamura, Toshiya Kanamatsu, Takafumi Kasayac,Katsunori Fujikura, Yoshihiro Ito, Tetsuro Tsuru, and Masataka Kinoshita. Extension of continental crust due 1 to anelastic deformation in the 2011 Tohoku-oki earthquake: The role of extensional faulting in the generation of a great tsunami. Earth and Planetary Science Letters, 2013, 364, p. 44-58
  • Fumiya Noguchi, Masaru Kawato, Takao Yoshida, Yoshihiro Fujiwara, Katsunori Fujikura, Kiyotaka Takishita. A novel alveolate in bivalves with chemosynthetic bacteria inhabiting deep-sea methane seeps. Journal of Eukaryotic Microbiology, 2013, 60, 2, p. 158-165
  • Extension of continental crust by anelastic deformation during the 2011 Tohoku-oki earthquake: The role of extensional faulting in the generation of a great tsunami. Earth and Planetary Science Letters, 2013, 364, p. 44-58, doi: 10.1016/j.epsl.2012.12.038
  • Takeshi Tsuji, Kiichiro Kawamura, Toshiya Kanamatsu, Takafumi Kasaya , Katsunori Fujikura, Yoshihiro Ito, Tetsuro Tsuru, Masataka Kinoshita,. Extension of continental crust by anelastic deformation during the 2011 Tohoku-oki earthquake: The role of extensional faulting in the generation of a great tsunami. Earth and Planetary Science Letters, 2013, 364, p. 44-58
  • Takashi Okutani, Katsunori Fujikura, Hiromi Watanabe and Yasuhiko Ohara. Calyptogena (Abyssogena) mariana: Discovery of a New Vesicomyid Clam from the Southern Mariana Trench. Venus, 2013, 71, 1-2, p. 39-47
  • Yoshimi Takahashi, Yoko Sasaki, Yoshito Chikaraishi, Masashi Tsuchiya, Hiromi Watanabe, Takashi Asahida, Tadashi Maruyama and Katsunori Fujikura. Does the symbiotic scale-worm feed on the host mussel in deep-sea vent fields?. Researches in Organic Geochemistry, 2012, 28, p. 23-26
  • 小原 泰彦,Mark K. Reagan, Katsunori Fujikura, Hiromi Watanabe, Katsuyoshi Michibayashi, Teruaki Ishii, Robert J Stern, Ignacio Pujana, Fernando Martinez, Guillaume Girard, Julia Ribeiro, Maryjo Brounce, Naoaki Komori, Masashi Kino. A serpentinite-hosted ecosystem in the Southern Mariana Forearc. Proceedings of the National Academy of Sciences of the USA, 2012, 109, p. 2831-2835, doi: 10.1073/pnas.1112005109
  • U. TSUNOGAI, A. KOSAKA, N. NAKAYAMA, D. D. KOMATSU, U. KONNO, S. KAMEYAMA, F. NAKAGAWA, H. SUMINO, K. NAGAO, K. FUJIKURA and H. MACHIYAMA. Origin and fate of deep-sea seeping methane bubbles at Kuroshima Knoll, Ryukyu forearc region, Japan. Geochemical Journal, 2010, 44, p. 461-476
  • Marine Biodiversity in Japanese Waters. PLoS ONE, 2010, 5, 8, doi: doi:10.1371/journal.pone.0011836
  • In situ flourochrome calcein marking of deep-sea molluscs using a new growth chamber. Aquat Ecol, 2010, 44, 1, p. 217-222, doi: 10.1007/s10452-009-9290-3
  • 藤原 義弘,奥谷喬司(海洋研究開発機構) , 山中寿朗(岡山大学) , 河戸勝(海洋研究開発機構) , 溝田智敏(岩手大学) , 藤倉克則(海洋研究開発機構) , 山本智子(鹿児島大学) , 大越健嗣(石巻専修大学). Solemya pervernicosa Lives in Sediment underneath Submerged Whale Carcasses: Its Biological Significance. Venus, 2009, 68, 1-2, p. 27-37
  • Sasaki, T., Okutani, T., and K. Fujikura. A new species of Pyropelta (Gastropoda: Pyropeltidae) from hydrothermal vents in the Okinawa Trough, southwestern Japan. Journal of Molluscan Studies, 2008, 74, p. 309-316
  • 藤原 義弘. Three-year investigations into sperm whale-fall ecosystems in Japan. Marine Ecology, 2007, 28, 1, p. 219-232
  • 藤倉　克則. Long-term in situ monitoring of spawning behavior and fecundity in Calyptogena spp.. MARINE ECOLOGY PROGRESS SERIES, 2007, 333, p. 185-193
  • Shigeaki Kojima, Hiromi Watanabe, Shinji Tsuchida, Katsunori Fujikura, Ashley A. Rowden, Ken Takai and Tomoyuki Miura. Phylogenetic relationships of a tube worm (Lamellibrachia juni) from three hydrothermal vent fields in the South Pacific. Journal of the Marine Biological Association of the United Kingdom, 2006, 86, p. 1357-1361
  • Anatomy of Bathyacmaea secunda Okutani, Fujikura & Sasaki, 1993 (Petellogastropoda: Acmaeidae). Journal of Molluscan Studies, 2006, 72, p. 295-309
  • Anatomy of Shinkailepas myojinensis Sasaki, Okutani & Fujikura, 2003 (Gastropoda: Neritopsina). Malacologia, 2006, 48, p. 1-26
  • 藤倉 克則. A New Species of Osedax (Annelida: Siboglinidae) Associated with Whale Carcasses off Kyushu, Japan. Zoological Science, 2006, 23, 8, p. 733-740
  • Genetic differentiation of Calyptogena bivalves betweens seep areas off central Honshu and hydrothermal vent fields in the Okinawa Trough. Venus, 2005, 64, p. 45-53
  • Molluscs from Hydrothermal Vents and Cold Seeps in Japan:A Review of Taxa Recorded in Twenty Recent Years (1984-2004). Venus, 2005, 64, p. 87-133
  • Phylogenetic relationship of Alviniconcha gastropods from the Indian Ocean to those from the Pacific Ocean (Mollusca: Provannidae) revealed by nucleotide sequences of mitochondrial DNA. Venus, 2004, 63, p. 65-68
  • A mass aggregation of the mussel Adipicola pacifica (Bivalvia: Mytilidae) on submerged whale bones. Venus, 2004, 63, p. 61-64
  • 小島 茂明,藤倉 克則 , 奥谷 喬司. Multiple trans-Pacific migrations of deep-sea vent/seep-endemic bivalves in the family Vesicomyidae. Mol. Phylogenetic Evol, 2004, p. 396-406
  • 奥谷 喬司,藤倉克則・佐々木猛智. Two New Species of Bathymodiolus (Bivalvia: Mytilidae) from Methane Seeps on the Kuroshima Knoll off the Yaeyama Islands, Southwestern Japan. Venus , 2004
  • Molecular taxonomy of vestimentiferans of the western Pacific, and their phylogenetic relationship to species of the eastern Pacific III. Alaysia-like vestimentiferans and relationships among families. Marine Biology, 2003, 142, p. 625-635
  • 藤倉 克則,大越健嗣（石巻専修大学）・長沼毅（広島大学）. Use of strontium as a marker for estimation of microscopic growth rates in a bivalve. Marine Ecology Progress Series 257:295-301, 2003
  • 佐々木 猛智,奥谷喬司、藤倉克則. New taxa and new records of patelliform gastropods associated with chemoautosysthesis-based communities in Japanese waters. Veliger 46/3/189-210, 2003
  • 大越 健嗣,大越和加、藤倉克則. 深海性二枚貝における埋在と付着の意義. Benthos Research 58/1/77-83, 2003
  • 大越 和加,大越健嗣、藤倉克則、藤原義弘. 南西諸島海域・日本海溝における深海性二枚貝の外套腔に生息する多毛類（予報）. Benthos Research , 2003
  • 新宅未笛,久野聡子, 岩崎裕美, 藤原義弘, 藤倉克則, 橋本惇. 太平洋西部・インド洋のシンカイヒバリガイ類の分子系統と分岐年代(予報). Benthos Research 58/1/34-39, 2003
  • 藤倉 克則. 化学合成がうみだすもうひとつの深海生態系. Benthos Research 58/1/16-19, 2003
  • Phylogenetic characterization and biomass estimation of bacterial endosymbionts associated with invertebrates dwelling in chemosynthetic communites of hydrothermal vent and cold seep fields. Marine Ecology Progress Series, 2002, 245, p. 61-67
  • Molecular taxonomy of vestimentiferans of the Western Pacific and their phylogenetic relationship to species of the Eastern Pacific. II. Families Escarpiidae and Arcovestiidae. Marine Biology, 2002, 141, p. 57-64
  • 藤倉 克則,橋本惇 , 奥谷喬司. Estimated Population Densities of Megafauna in two chemosynthesis-based Communities: a Cold Seep in Sagami Bay and a Hydrothermal Vent in the Okinawa Trough. Benthos Research 57/1/21-30, 2002
  • 藤倉 克則,藤原義弘・小島茂明・奥谷　喬司. Micro-scale distribution of mollusks occurring in deep-sea chemosynthesis-based communities in the Japan Trench. Venus 60/4/225-236, 2002
  • 奥谷 喬司,藤倉克則. Abyssal Gastropods and Bivalves Collected by Shinkai 6500 on the Slope of the Japan Trench. Venus 60/4/211-224, 2002
  • Phylogeny of hydrothermal-vent-endemic gastropods Alviniconcha spp. from the western Pacific revealed by mitochondrial DNA sequences. Biological Bulletin, 2001, 200, p. 298-304
  • 山中 寿朗,溝田智俊・牧陽之助・藤倉克則・千葉仁. Sulfur Isotope Composition of Soft Tissues of Deep-sea Mussels, Bathymodiolus spp., in Japanese Waters. Benthos Research Vol. 55 No. 2 63-68, 2000
  • 藤倉 克則,土田真二、橋本惇. Density estimate of the beni-zuwai crab Chionoecetes japonicus, by an in-situ observation method. Fisheries Science Vol. 66, No. 6, 1183-1185, 2000
  • 鈴木 知彦,Hozumi Kawamichi, Ryuji Ohtsuki,岩井雅夫、藤倉克則. Isolation and cDNA-derived amino acid sequences of hemoglobin and myoblobin from the deep-sea clam Calyptogena kaikoi. Biochimica et Biophysica Acta 1478 p152-158, 2000
  • 奥谷 喬司（日本大学）,藤倉克則、小島茂明（東京大学海洋研究所）. New taxa and review of vesicomyid bivalves collected from the northwest Pacific by deep sea research systems of Japan Marine Science and Technology Center. Venus 59 (2) 83-101, 2000
  • 藤倉 克則,小島茂明（東京大学海洋研究所）、藤原義弘、橋本惇、奥谷喬司（日本大学）. New Distribution Records of Vesicomyid Bivalves from Deep-sea Chemosynthesis-based Communities in Japanese Waters. Venus 59 (2) 103-121, 2000
  • 藤倉 克則,小島茂明、玉木賢策、牧陽之助、James Hunt、奥谷喬司. The deepest chemosynthesis-based community yet discovered from the hadal zone, 7326m deep, in the Japan Trench. Marine Ecology Progress Series vol. 190: 17p-26p, 1999
  • 長沼 毅（広島大学）,C.Julius Meisel(Acculab Inc.)、和田秀樹（静岡大）、加藤幸弘（水路部）、竹内章（富山大）、藤倉克則、仲二郎、藤岡換太郎. Sea-floor fissures, biological communities and sediment fatty acids of the Northern Okushiri Ridge, Japan Sea: Implications for possible methane seepage. The Island Arc Vol.8 p232-244, 1999
  • 奥谷 喬司,藤倉克則、小島茂明（東大）. Two New Hadal Bivalves of the Family Thyasiridae from the Plate Convergent Area of the Japan Trench. VENUS Vol.58,No.2(1999):p49-54, 1999
  • En echelon patterns of Calyptogena colonies in the Japan Trench. Geology, 1996, 24, 9, p. 807-810
  • Life habitat of vesicomyid clam, Calyptogena soyoae, and hydrogen sulfide concentration in interstitial waters in Sagami Bay, Japan. Journal of Oceanography, 1995, 51, p. 341-350
  • 藤倉 克則. 相模湾初島沖の化学合成生物群集に関する比較群集生態学的研究. 東京水産大学　博士論文 , 1995
  • 小島 茂明,R.Segawa(東京都立大) , T.Kobayashi(養殖研) , T.Hashimoto(数理解析研) , 藤倉 克則 , 橋本 惇 , 太田 秀(東大海洋研). Phylogenetic relationships among species of Calyptogena (Bivalvia:Vesicomyidae) collected around Japan revealed by nucleotide sequences of mitochondrial genes. Marine Biology, 1995, 122, 3, p. 401-407
  • 奥谷 喬司（東京水産大）,藤倉克則・佐々木猛智（東京水産大）. New taxa and new distribution records of deepsea gastropods collected from or near the chemosynthetic communities in Japanese water. Bulletin of the National Science Museum, Tokyo, Series A Vol.19,No.4,p124-143, 1993
  • 奥谷 喬司,藤倉克則・橋本惇. Another new species of Calyptogena (Bivalvia: Vesicomyidae) from bathyal depth in Suruga Bay, Japan. The Japanese Journal of Malacology Vol.52,No.2(1993):121-126, 1993
  • A new species of vesicomyid bivalve associated with hydrothermal vents near Amami-Ohshima Island, Japan. Venus, 1992, 51, p. 224-233
  • Five bathyal gastropods living within or near the Calyptogena-community of the Hatsushima Islet, Sagami Bay. Venus, 1992, 51, p. 137-148
  • A New turrid gastropod associated with metachromatic seabed near the Calyptogena-community in Sagami Bay. Venus, 1992, 51, p. 1-7
  • 奥谷 喬司（東京水産大）,橋本惇、藤倉克則. 南奄西海丘の熱水噴出域付近に産するシロウリガイ類の１新種. 日本貝類学会誌 Vol.51,No.4(1992):225-223, 1992
  • Jean-Marie Auzende,Manabu TANAHASHI, Valerie BENDEL, 藤倉克則, Patrick GEISTDOERFER, E. GRACIA-MONT, M. JOSHIMA, K. KISHIMOTO, K. MITSUZAWA, M. MURAI, Y. NOJIRI, H. ONDEREAS, C. PRATT and E. RUELLAN. Preliminary Results of Shinkai 6500 Dives on the North Fiji Basin Ridge (SW Pacific) -STARMER-. C. R. Acad. Sci. Paris, t.314, Serie II, 1992, p491
  • 藤倉 克則,奥谷喬司(東京水産大). A New Turbinid Gastropod Collected from the Warm Seep Site in the Minami-Ensei Knoll, West of the Amami-Oshima Island, Japan. 日本貝類学会誌 , 1990