Researcher Information
researchmap URL
Research History
- Apr. 2019 - Present
Japan Agency for Marine-Earth Science and Technology, 超先鋭研究開発部門, 准研究職 - Apr. 2014 - Mar. 2019
Japan Agency for Marine-Earth Science and Technology, 深海・地殻内生物圏研究分野, 技術職 - Apr. 2009 - Mar. 2014
独立行政法人海洋研究開発機構, 海洋・極限環境生物圏領域, 技術研究職 - Apr. 2004 - Mar. 2009
独立行政法人海洋研究開発機構, 極限環境生物圏研究センター, 研究推進スタッフ
Research activity information
Papers
- Koudai Taguchi; Shinsuke Kawagucci; Alexis Gilbert; Yuichiro Ueno; Yohei Matsui; Yoshinori Takano; Eiji Tasumi; Masayuki Miyazaki; Akiko Makabe; Junichi Miyazaki; Hikaru Sawada; Naoto Takahata; Ken Takai
Reassessing the origin of organic compounds in Mariana forearc serpentinite mud volcanoes: insights from isotopologue and molecular signatures
Progress in Earth and Planetary Science, 24 Feb. 2026 - Mikako Tachioka; Masayuki Miyazaki; Mikiko Tsudome; Miwako Tsuda; Kohsuke Uchimura; Yoshihiro Takaki; Shigeru Deguchi
Marinicellulosiphila megalodicopiae gen. nov., sp. nov., a deep-sea alkaliphilic cellulolytic bacterium isolated from an endemic ascidian Megalodicopia hians
International Journal of Systematic and Evolutionary Microbiology, 02 Apr. 2025
75, 4 - Hirokazu Shimoshige; Keiichi Yanagisawa; Masayuki Miyazaki; Yoshihiro Takaki; Shigeru Shimamura; Hidetaka Nomaki; Mizuki Fukui; Hiroki Shirakawa; Hideki Kobayashi; Azuma Taoka; Toru Maekawa
Isolation and cultivation of a novel freshwater magnetotactic coccus FCR-1 containing unchained magnetosomes
Communications Biology, 27 Mar. 2025
8, 1 - Hiroyuki Imachi; Masaru K. Nobu; Shun’ichi Ishii; Yuga Hirakata; Tetsuro Ikuta; Yuta Isaji; Makoto Miyata; Masayuki Miyazaki; Yuki Morono; Kazuyoshi Murata; Satoshi Nakagawa; Miyuki Ogawara; Satoshi Okada; Yumi Saito; Sanae Sakai; Shigeru Shimamura; Yuhei O. Tahara; Yoshihiro Takaki; Yoshinori Takano; Eiji Tasumi; Katsuyuki Uematsu; Toshihiro Yoshimura; Ken Takai
Eukaryotes’ closest relatives are internally simple syntrophic archaea
26 Feb. 2025 - Mikako Tachioka; Mikiko Tsudome; Miwako Tsuda; Satoshi Hiraoka; Masayuki Miyazaki; Yoshihiro Takaki; Shigeru Deguchi
Characteristics of deep-sea microbial cellulases: key determinants of the ultimate fate of plant biomass on Earth
Journal of Wood Science, 14 Nov. 2024
70, 1 - Hiroyuki Imachi; Masaru K Nobu; Shingo Kato; Yoshihiro Takaki; Masayuki Miyazaki; Makoto Miyata; Miyuki Ogawara; Yumi Saito; Sanae Sakai; Yuhei O Tahara; Yoshinori Takano; Eiji Tasumi; Katsuyuki Uematsu; Toshihiro Yoshimura; Takashi Itoh; Moriya Ohkuma; Ken Takai
Promethearchaeum syntrophicum gen. nov., sp. nov., an anaerobic, obligately syntrophic archaeon, the first isolate of the lineage 'Asgard' archaea, and proposal of the new archaeal phylum Promethearchaeota phyl. nov. and kingdom Promethearchaeati regn. nov.
International journal of systematic and evolutionary microbiology, Jul. 2024
74, 7 - Hisako Hirayama; Yoshihiro Takaki; Mariko Abe; Masayuki Miyazaki; Katsuyuki Uematsu; Yohei Matsui; Ken Takai
Methylomarinovum tepidoasis sp. nov., a moderately thermophilic methanotroph of the family Methylothermaceae isolated from a deep-sea hydrothermal field
International Journal of Systematic and Evolutionary Microbiology, 13 Mar. 2024 - Norio Kitadai; Shigeru Shimamura; Wataru Takahagi; Masayuki Miyazaki; Eiji Tasumi; Satoshi Okada
Elemental sulfur, hydrogen sulfide, and carbon monoxide-driven dimerization of glycine at sub-millimolar concentrations: Implications for the origin of life
Geochimica et Cosmochimica Acta, 15 May 2023
349, 55, 63 - Kazuki Tachibana; Motohiro Shimanaga; Dewi Langlet; Koji Seike; Masayuki Miyazaki; Mitsuhiro Yoshida; Takuro Nunoura; Hidetaka Nomaki
Meiofauna in the southeastern Bering Sea: community composition and structuring environmental factors
Frontiers in Marine Science, 27 Apr. 2023
10 - Mikiko Tsudome; Mikako Tachioka; Masayuki Miyazaki; Miwako Tsuda; Yoshihiro Takaki; Shigeru Deguchi
Marinagarivorans cellulosilyticus sp. nov., a cellulolytic bacterium isolated from the deep-sea off Noma-misaki, Japan.
International journal of systematic and evolutionary microbiology, Mar. 2023
73, 3 - Motoko Igisu; Masayuki Miyazaki; Sanae Sakai; Satoshi Nakagawa; Hiroyuki D Sakai; Ken Takai
Domain-level Identification of Single Prokaryotic Cells by Optical Photothermal Infrared Spectroscopy.
Microbes and environments, 2023
38, 4 - Hiroyuki Imachi; Masaru K. Nobu; Masayuki Miyazaki; Eiji Tasumi; Yumi Saito; Sanae Sakai; Miyuki Ogawara; Akiyoshi Ohashi; Ken Takai
Cultivation of previously uncultured microorganisms with a continuous-flow down-flow hanging sponge (DHS) bioreactor, using a syntrophic archaeon culture obtained from deep marine sediment as a case study
Nature Protocols, Dec. 2022 - Hirokazu Shimoshige; Hideki Kobayashi; Shigeru Shimamura; Masayuki Miyazaki; Toru Maekawa
Fundidesulfovibrio magnetotacticus sp. nov., a sulphate-reducing magnetotactic bacterium, isolated from sediments and freshwater of a pond.
International journal of systematic and evolutionary microbiology, Sep. 2022
72, 9 - Mikiko Tsudome; Mikako Tachioka; Masayuki Miyazaki; Kohsuke Uchimura; Miwako Tsuda; Yoshihiro Takaki; Shigeru Deguchi
An ultrasensitive nanofiber-based assay for enzymatic hydrolysis and deep-sea microbial degradation of cellulose.
iScience, 19 Aug. 2022
25, 8, 104732, 104732 - Norio Kitadai; Satoshi Okada; Akiko Makabe; Eiji Tasumi; Masayuki Miyazaki
Polysulfide-assisted urea synthesis from carbon monoxide and ammonia in water
PeerJ Organic Chemistry, 11 Jul. 2022 - Hiroshi Kikukawa; Takuma Okaya; Takashi Maoka; Masayuki Miyazaki; Keita Murofushi; Takanari Kato; Yoko Hirono-Hara; Masahiro Katsumata; Shoichi Miyahara; Kiyotaka Y. Hara
Carotenoid Nostoxanthin Production by Sphingomonas sp. SG73 Isolated from Deep Sea Sediment
Marine Drugs, 14 May 2021 - Lily Momper; Amanda Semler; Guang Sin Lu; Masayuki Miyazaki; Hiroyuki Imachi; Jan P Amend
Rectinema subterraneum sp. nov, a chemotrophic spirochaete isolated from the deep terrestrial subsurface.
International journal of systematic and evolutionary microbiology, Aug. 2020
70, 8, 4739, 4747 - Hiroyuki Imachi; Masaru K. Nobu; Nozomi Nakahara; Yuki Morono; Miyuki Ogawara; Yoshihiro Takaki; Yoshinori Takano; Katsuyuki Uematsu; Tetsuro Ikuta; Motoo Ito; Yohei Matsui; Masayuki Miyazaki; Kazuyoshi Murata; Yumi Saito; Sanae Sakai; Chihong Song; Eiji Tasumi; Yuko Yamanaka; Takashi Yamaguchi; Yoichi Kamagata; Hideyuki Tamaki; Ken Takai
Isolation of an archaeon at the prokaryote–eukaryote interface
Nature, 23 Jan. 2020 - Nozomi Nakahara; Masaru K Nobu; Yoshihiro Takaki; Masayuki Miyazaki; Eiji Tasumi; Sanae Sakai; Miyuki Ogawara; Naoko Yoshida; Hideyuki Tamaki; Yuko Yamanaka; Arata Katayama; Takashi Yamaguchi; Ken Takai; Hiroyuki Imachi
Aggregatilinea lenta gen. nov., sp. nov., a slow-growing, facultatively anaerobic bacterium isolated from subseafloor sediment, and proposal of the new order Aggregatilineales ord. nov. within the class Anaerolineae of the phylum Chloroflexi.
International journal of systematic and evolutionary microbiology, Apr. 2019
69, 4, 1185, 1194 - Sanae Sakai; Yoshihiro Takaki; Masayuki Miyazaki; Miyuki Ogawara; Katsunori Yanagawa; Junichi Miyazaki; Ken Takai
Methanofervidicoccus abyssi gen. nov., sp. nov., a hydrogenotrophic methanogen, isolated from a hydrothermal vent chimney in the Mid-Cayman Spreading Center, the Caribbean Sea.
International journal of systematic and evolutionary microbiology, Apr. 2019
69, 4, 1225, 1230 - Hiroyuki Imachi; Eiji Tasumi; Yoshihiro Takaki; Tatsuhiko Hoshino; Florence Schubotz; Shuchai Gan; Tzu-Hsuan Tu; Yumi Saito; Yuko Yamanaka; Akira Ijiri; Yohei Matsui; Masayuki Miyazaki; Yuki Morono; Ken Takai; Kai-Uwe Hinrichs; Fumio Inagaki
Cultivable microbial community in 2-km-deep, 20-million-year-old subseafloor coalbeds through ~1000 days anaerobic bioreactor cultivation.
Scientific reports, 19 Feb. 2019
9, 1, 2305, 2305 - J. Aguzzi; E. Fanelli; T. Ciuffardi; A. Schirone; F. C. De Leo; C. Doya; M. Kawato; M. Miyazaki; Y. Furushima; C. Costa; Y. Fujiwara
Faunal activity rhythms influencing early community succession of an implanted whale carcass offshore Sagami Bay, Japan
Scientific Reports, 01 Dec. 2018
8, 1 - Yuji Onishi; Sho Shimamura; Toshiro Yamanaka; Rei Nakayama; Ken Ichi Ozaki; Masayuki Miyazaki; Urumu Tsunogai; Yoshihiro Fujiwara
Variation of geochemical environments associated with whale-fall biomass mineralization processes in the sediment during the mobile scavenger, enrichment opportunist, and sulfophilic stages
Marine Biology, 01 Sep. 2018
165, 9 - Takuro Nunoura; Yoshito Chikaraishi; Rikihisa Izaki; Takashi Suwa; Takaaki Sato; Takeshi Harada; Koji Mori; Yumiko Kato; Masayuki Miyazaki; Shigeru Shimamura; Katsunori Yanagawa; Aya Shuto; Naohiko Ohkouchi; Nobuyuki Fujita; Yoshihiro Takaki; Haruyuki Atomi; Ken Takai
A primordial and reversible TCA cycle in a facultatively chemolithoautotrophic thermophile.
Science (New York, N.Y.), 02 Feb. 2018
359, 6375, 559, 563 - Shingo Kato; Masayuki Miyazaki; Sakiko Kikuchi; Teruhiko Kashiwabara; Yumi Saito; Eiji Tasumi; Katsuhiko Suzuki; Ken Takai; Linh Thi Thuy Cao; Akiyoshi Ohashi; Hiroyuki Imachi
Biotic manganese oxidation coupled with methane oxidation using a continuous-flow bioreactor system under marine conditions.
Water science and technology : a journal of the International Association on Water Pollution Research, Oct. 2017
76, 7-8, 1781, 1795 - Akihiro Ninomiya; Yohei Katsuyama; Takefumi Kuranaga; Masayuki Miyazaki; Yuichi Nogi; Shigeru Okada; Toshiyuki Wakimoto; Yasuo Ohnishi; Shigeki Matsunaga; Kentaro Takada
Corrigendum: Biosynthetic Gene Cluster for Surugamide A Encompasses an Unrelated Decapeptide, Surugamide F.
Chembiochem : a European journal of chemical biology, 05 Sep. 2017
18, 17, 1770, 1770 - Hiroko Makita; Emiko Tanaka; Satoshi Mitsunobu; Masayuki Miyazaki; Takuro Nunoura; Katsuyuki Uematsu; Yoshihiro Takaki; Shinro Nishi; Shigeru Shimamura; Ken Takai
Mariprofundus micogutta sp. nov., a novel iron-oxidizing zetaproteobacterium isolated from a deep-sea hydrothermal field at the Bayonnaise knoll of the Izu-Ogasawara arc, and a description of Mariprofundales ord. nov. and Zetaproteobacteria classis nov.
Archives of microbiology, Mar. 2017
199, 2, 335, 346 - Akihiro Ninomiya; Yohei Katsuyama; Takefumi Kuranaga; Masayuki Miyazaki; Yuichi Nogi; Shigeru Okada; Toshiyuki Wakimoto; Yasuo Ohnishi; Shigeki Matsunaga; Kentaro Takada
Biosynthetic Gene Cluster for Surugamide A Encompasses an Unrelated Decapeptide, Surugamide F.
Chembiochem : a European journal of chemical biology, 15 Sep. 2016
17, 18, 1709, 12 - Tomo-O Watsuji; Emi Hada; Masayuki Miyazaki; Masako Ichimura; Ken Takai
Thiomicrospira hydrogeniphila sp. nov., an aerobic, hydrogen- and sulfur-oxidizing chemolithoautotroph isolated from a seawater tank containing a block of beef tallow.
International journal of systematic and evolutionary microbiology, Sep. 2016
66, 9, 3688, 3693 - Hiroyuki Imachi; Sanae Sakai; Takaaki Kubota; Masayuki Miyazaki; Yayoi Saito; Ken Takai
Sedimentibacter acidaminivorans sp. nov., an anaerobic, amino-acid-utilizing bacterium isolated from marine subsurface sediment.
International journal of systematic and evolutionary microbiology, Mar. 2016
66, 3, 1293, 1300 - Masayuki Miyazaki; Sanae Sakai; Kirsti M Ritalahti; Yayoi Saito; Yuko Yamanaka; Yumi Saito; Akihiko Tame; Katsuyuki Uematsu; Frank E Löffler; Ken Takai; Hiroyuki Imachi
Sphaerochaeta multiformis sp. nov., an anaerobic, psychrophilic bacterium isolated from subseafloor sediment, and emended description of the genus Sphaerochaeta.
International journal of systematic and evolutionary microbiology, Dec. 2014
64, Pt 12, 4147, 4154 - Yuichi Nogi; Masaki Yoshizumi; Koei Hamana; Masayuki Miyazaki; Koki Horikoshi
Povalibacter uvarum gen. nov., sp. nov., a polyvinyl-alcohol-degrading bacterium isolated from grapes.
International journal of systematic and evolutionary microbiology, Aug. 2014
64, Pt 8, 2712, 2717 - Masayuki Miyazaki; Sanae Sakai; Yuko Yamanaka; Yumi Saito; Ken Takai; Hiroyuki Imachi
Spirochaeta psychrophila sp. nov., a psychrophilic spirochaete isolated from subseafloor sediment, and emended description of the genus Spirochaeta.
International journal of systematic and evolutionary microbiology, Aug. 2014
64, Pt 8, 2798, 2804 - Masayuki Miyazaki; Yuichi Nogi
The family psychromonadaceae
The Prokaryotes: Gammaproteobacteria, 01 Jul. 2014
9783642389221, 583, 590 - Yuichi Nogi; Masaki Yoshizumi; Masayuki Miyazaki
Thalassospira povalilytica sp. nov., a polyvinyl-alcohol-degrading marine bacterium.
International journal of systematic and evolutionary microbiology, Apr. 2014
64, Pt 4, 1149, 1153 - Hiroyuki Imachi; Sanae Sakai; Julius S Lipp; Masayuki Miyazaki; Yumi Saito; Yuko Yamanaka; Kai-Uwe Hinrichs; Fumio Inagaki; Ken Takai
Pelolinea submarina gen. nov., sp. nov., an anaerobic, filamentous bacterium of the phylum Chloroflexi isolated from subseafloor sediment.
International journal of systematic and evolutionary microbiology, Mar. 2014
64, Pt 3, 812, 818 - Hisako Hirayama; Mariko Abe; Masayuki Miyazaki; Takuro Nunoura; Yasuo Furushima; Hiroyuki Yamamoto; Ken Takai
Methylomarinovum caldicuralii gen. nov., sp. nov., a moderately thermophilic methanotroph isolated from a shallow submarine hydrothermal system, and proposal of the family Methylothermaceae fam. nov.
International journal of systematic and evolutionary microbiology, Mar. 2014
64, Pt 3, 989, 999 - Takuro Nunoura; Yoshihiro Takaki; Hiromi Kazama; Jungo Kakuta; Shigeru Shimamura; Hiroko Makita; Miho Hirai; Masayuki Miyazaki; Ken Takai
Physiological and genomic features of a novel sulfur-oxidizing gammaproteobacterium belonging to a previously uncultivated symbiotic lineage isolated from a hydrothermal vent.
PloS one, 2014
9, 8, e104959 - Masataka Aoki; Masayuki Ehara; Yumi Saito; Hideyoshi Yoshioka; Masayuki Miyazaki; Yayoi Saito; Ai Miyashita; Shuji Kawakami; Takashi Yamaguchi; Akiyoshi Ohashi; Takuro Nunoura; Ken Takai; Hiroyuki Imachi
A long-term cultivation of an anaerobic methane-oxidizing microbial community from deep-sea methane-seep sediment using a continuous-flow bioreactor.
PloS one, 2014
9, 8, e105356 - Keiji Numata; Kumiko Morisaki; Satoshi Tomizawa; Misato Ohtani; Taku Demura; Masayuki Miyazaki; Yuichi Nogi; Shigeru Deguchi; Yoshiharu Doi
Synthesis of poly- and oligo(hydroxyalkanoate)s by deep-sea bacteria, Colwellia spp., Moritella spp., and Shewanella spp
Polymer Journal, Oct. 2013
45, 10, 1094, 1100 - Kentaro Takada; Akihiro Ninomiya; Masato Naruse; Yi Sun; Masayuki Miyazaki; Yuichi Nogi; Shigeru Okada; Shigeki Matsunaga
Surugamides A-E, cyclic octapeptides with four D-amino acid residues, from a marine Streptomyces sp.: LC-MS-aided inspection of partial hydrolysates for the distinction of D- and L-amino acid residues in the sequence.
The Journal of organic chemistry, 05 Jul. 2013
78, 13, 6746, 50 - Yasuhiro Shimane; Yusuke Tsuruwaka; Masayuki Miyazaki; Kozue Mori; Hiroaki Minegishi; Akinobu Echigo; Yukari Ohta; Tadashi Maruyama; William D Grant; Yuji Hatada
Salinisphaera japonica sp. nov., a moderately halophilic bacterium isolated from the surface of a deep-sea fish, Malacocottus gibber, and emended description of the genus Salinisphaera.
International journal of systematic and evolutionary microbiology, Jun. 2013
63, Pt 6, 2180, 2185 - Ken Takai; Mariko Abe; Masayuki Miyazaki; Osamu Koide; Takuro Nunoura; Hiroyuki Imachi; Fumio Inagaki; Tohru Kobayashi
Sunxiuqinia faeciviva sp. nov., a facultatively anaerobic organoheterotroph of the Bacteroidetes isolated from deep subseafloor sediment.
International journal of systematic and evolutionary microbiology, May 2013
63, Pt 5, 1602, 1609 - Taishi Tsubouchi; Yasuhiro Shimane; Kozue Mori; Masayuki Miyazaki; Akihiro Tame; Katsuyuki Uematsu; Tadashi Maruyama; Yuji Hatada
Loktanella cinnabarina sp. nov., isolated from a deep subseafloor sediment, and emended description of the genus Loktanella.
International journal of systematic and evolutionary microbiology, Apr. 2013
63, Pt 4, 1390, 1395 - Hisako Hirayama; Hiroyuki Fuse; Mariko Abe; Masayuki Miyazaki; Takamichi Nakamura; Takuro Nunoura; Yasuo Furushima; Hiroyuki Yamamoto; Ken Takai
Methylomarinum vadi gen. nov., sp. nov., a methanotroph isolated from two distinct marine environments.
International journal of systematic and evolutionary microbiology, Mar. 2013
63, Pt 3, 1073, 1082 - Takuro Nunoura; Miho Hirai; Masayuki Miyazaki; Hiromi Kazama; Hiroko Makita; Hisako Hirayama; Yasuo Furushima; Hiroyuki Yamamoto; Hiroyuki Imachi; Ken Takai
Isolation and characterization of a thermophilic, obligately anaerobic and heterotrophic marine Chloroflexi bacterium from a Chloroflexi-dominated microbial community associated with a Japanese shallow hydrothermal system, and proposal for Thermomarinilinea lacunofontalis gen. nov., sp. nov.
Microbes and environments, 2013
28, 2, 228, 35 - Hiromi Uchida; Koei Hamana; Masayuki Miyazaki; Takao Yoshida; Yuichi Nogi
Parasphingopyxis lamellibrachiae gen. nov., sp. nov., isolated from a marine annelid worm.
International journal of systematic and evolutionary microbiology, Sep. 2012
62, Pt 9, 2224, 2228 - Hiroko Makita; Satoshi Nakagawa; Masayuki Miyazaki; Ko-ichi Nakamura; Fumio Inagaki; Ken Takai
Thiofractor thiocaminus gen. nov., sp. nov., a novel hydrogen-oxidizing, sulfur-reducing epsilonproteobacterium isolated from a deep-sea hydrothermal vent chimney in the Nikko Seamount field of the northern Mariana Arc.
Archives of microbiology, Sep. 2012
194, 9, 785, 94 - Masayuki Miyazaki; Osamu Koide; Tohru Kobayashi; Kozue Mori; Shigeru Shimamura; Takuro Nunoura; Hiroyuki Imachi; Fumio Inagaki; Takahiko Nagahama; Yuichi Nogi; Shigeru Deguchi; Ken Takai
Geofilum rubicundum gen. nov., sp. nov., isolated from deep subseafloor sediment.
International journal of systematic and evolutionary microbiology, May 2012
62, Pt 5, 1075, 1080 - Hiroshi Izumi; Takuro Nunoura; Masayuki Miyazaki; Sayaka Mino; Tomohiro Toki; Ken Takai; Yoshihiko Sako; Tomoo Sawabe; Satoshi Nakagawa
Thermotomaculum hydrothermale gen. nov., sp. nov., a novel heterotrophic thermophile within the phylum Acidobacteria from a deep-sea hydrothermal vent chimney in the Southern Okinawa Trough.
Extremophiles : life under extreme conditions, Mar. 2012
16, 2, 245, 53 - Xiaochi Zhang; Tomomi Nakahara; Masayuki Miyazaki; Yuichi Nogi; Shigeto Taniyama; Osamu Arakawa; Tetsushi Inoue; Toshiaki Kudo
Diversity and function of aerobic culturable bacteria in the intestine of the sea cucumber Holothuria leucospilota.
The Journal of general and applied microbiology, 2012
58, 6, 447, 56 - Hisako Hirayama; Yohey Suzuki; Mariko Abe; Masayuki Miyazaki; Hiroko Makita; Fumio Inagaki; Katsuyuki Uematsu; Ken Takai
Methylothermus subterraneus sp. nov., a moderately thermophilic methanotroph isolated from a terrestrial subsurface hot aquifer.
International journal of systematic and evolutionary microbiology, Nov. 2011
61, Pt 11, 2646, 2653 - Yasuhiro Shimane; Yuji Hatada; Hiroaki Minegishi; Akinobu Echigo; Syuhei Nagaoka; Masayuki Miyazaki; Yukari Ohta; Tadashi Maruyama; Ron Usami; William D Grant; Koki Horikoshi
Salarchaeum japonicum gen. nov., sp. nov., an aerobic, extremely halophilic member of the Archaea isolated from commercial salt.
International journal of systematic and evolutionary microbiology, Sep. 2011
61, Pt 9, 2266, 2270 - Atsushi Baba; Masayuki Miyazaki; Takahiko Nagahama; Yuichi Nogi
Microbulbifer chitinilyticus sp. nov. and Microbulbifer okinawensis sp. nov., chitin-degrading bacteria isolated from mangrove forests.
International journal of systematic and evolutionary microbiology, Sep. 2011
61, Pt 9, 2215, 2220 - Takahiko Nagahama; Eriko Takahashi; Yuriko Nagano; Mohamed A Abdel-Wahab; Masayuki Miyazaki
Molecular evidence that deep-branching fungi are major fungal components in deep-sea methane cold-seep sediments.
Environmental microbiology, Aug. 2011
13, 8, 2359, 70 - Yuto Yashiro; Sanae Sakai; Masayuki Ehara; Masayuki Miyazaki; Takashi Yamaguchi; Hiroyuki Imachi
Methanoregula formicica sp. nov., a methane-producing archaeon isolated from methanogenic sludge.
International journal of systematic and evolutionary microbiology, Jan. 2011
61, Pt 1, 53, 59 - Yasuhiro Shimane; Yuji Hatada; Hiroaki Minegishi; Toru Mizuki; Akinobu Echigo; Masayuki Miyazaki; Yukari Ohta; Ron Usami; William D Grant; Koki Horikoshi
Natronoarchaeum mannanilyticum gen. nov., sp. nov., an aerobic, extremely halophilic archaeon isolated from commercial salt.
International journal of systematic and evolutionary microbiology, Nov. 2010
60, Pt 11, 2529, 2534 - Masayuki Miyazaki; Yuriko Nagano; Yoshihiro Fujiwara; Yuji Hatada; Yuichi Nogi
Aquimarina macrocephali sp. nov., isolated from sediment adjacent to sperm whale carcasses.
International journal of systematic and evolutionary microbiology, Oct. 2010
60, Pt 10, 2298, 2302 - Kohsuke Uchimura; Masayuki Miyazaki; Yuichi Nogi; Tohru Kobayashi; Koki Horikoshi
Cloning and sequencing of alginate lyase genes from deep-sea strains of Vibrio and Agarivorans and characterization of a new Vibrio enzyme.
Marine biotechnology (New York, N.Y.), Oct. 2010
12, 5, 526, 33 - Takuro Nunoura; Miho Hirai; Hiroyuki Imachi; Masayuki Miyazaki; Hiroko Makita; Hisako Hirayama; Yasuo Furushima; Hiroyuki Yamamoto; Ken Takai
Kosmotoga arenicorallina sp. nov. a thermophilic and obligately anaerobic heterotroph isolated from a shallow hydrothermal system occurring within a coral reef, southern part of the Yaeyama Archipelago, Japan, reclassification of Thermococcoides shengliensis as Kosmotoga shengliensis comb. nov., and emended description of the genus Kosmotoga.
Archives of microbiology, Oct. 2010
192, 10, 811, 9 - Ken Takai; Masayuki Miyazaki; Hisako Hirayama; Satoshi Nakagawa; Joël Querellou; Anne Godfroy
Isolation and physiological characterization of two novel, piezophilic, thermophilic chemolithoautotrophs from a deep-sea hydrothermal vent chimney.
Environmental microbiology, Aug. 2009
11, 8, 1983, 97 - Tohru Kobayashi; Kohsuke Uchimura; Masayuki Miyazaki; Yuichi Nogi; Koki Horikoshi
A new high-alkaline alginate lyase from a deep-sea bacterium Agarivorans sp.
Extremophiles : life under extreme conditions, Jan. 2009
13, 1, 121, 9 - Masayuki Miyazaki; Yuichi Nogi; Yoshihiro Fujiwara; Masaru Kawato; Takahiko Nagahama; Kaoru Kubokawa; Koki Horikoshi
Amphritea japonica sp. nov. and Amphritea balenae sp. nov., isolated from the sediment adjacent to sperm whale carcasses off Kagoshima, Japan.
International journal of systematic and evolutionary microbiology, Dec. 2008
58, Pt 12, 2815, 20 - Ken Takai; Kentaro Nakamura; Tomohiro Toki; Urumu Tsunogai; Masayuki Miyazaki; Junichi Miyazaki; Hisako Hirayama; Satoshi Nakagawa; Takuro Nunoura; Koki Horikoshi
Cell proliferation at 122°C and isotopically heavy CH 4 production by a hyperthermophilic methanogen under high-pressure cultivation
Proceedings of the National Academy of Sciences, 05 Aug. 2008 - Masayuki Miyazaki; Yuichi Nogi; Yoshihiro Fujiwara; Koki Horikoshi
Psychromonas japonica sp. nov., Psychromonas aquimarina sp. nov., Psychromonas macrocephali sp. nov. and Psychromonas ossibalaenae sp. nov., psychrotrophic bacteria isolated from sediment adjacent to sperm whale carcasses off Kagoshima, Japan.
International journal of systematic and evolutionary microbiology, Jul. 2008
58, Pt 7, 1709, 14 - Masayuki Miyazaki; Yuichi Nogi; Yukari Ohta; Yuji Hatada; Yoshihiro Fujiwara; Susumu Ito; Koki Horikoshi
Microbulbifer agarilyticus sp. nov. and Microbulbifer thermotolerans sp. nov., agar-degrading bacteria isolated from deep-sea sediment.
International journal of systematic and evolutionary microbiology, May 2008
58, Pt 5, 1128, 33 - Masayuki Miyazaki; Yuichi Nogi; Yoshihiro Fujiwara; Masaru Kawato; Kaoru Kubokawa; Koki Horikoshi
Neptunomonas japonica sp. nov., an Osedax japonicus symbiont-like bacterium isolated from sediment adjacent to sperm whale carcasses off Kagoshima, Japan.
International journal of systematic and evolutionary microbiology, Apr. 2008
58, Pt 4, 866, 71 - Takahiko Nagahama; Mohamed Ahmed Abdel-Wahab; Yuichi Nogi; Masayuki Miyazaki; Katsuyuki Uematsu; Makiko Hamamoto; Koki Horikoshi
Dipodascus tetrasporeus sp. nov., an ascosporogenous yeast isolated from deep-sea sediments in the Japan Trench.
International journal of systematic and evolutionary microbiology, Apr. 2008
58, Pt 4, 1040, 6 - Takuro Nunoura; Hanako Oida; Masayuki Miyazaki; Yohey Suzuki
Thermosulfidibacter takaii gen. nov., sp. nov., a thermophilic, hydrogen-oxidizing, sulfur-reducing chemolithoautotroph isolated from a deep-sea hydrothermal field in the Southern Okinawa Trough.
International journal of systematic and evolutionary microbiology, Mar. 2008
58, Pt 3, 659, 65 - Takuro Nunoura; Masayuki Miyazaki; Yohey Suzuki; Ken Takai; Koki Horikoshi
Hydrogenivirga okinawensis sp. nov., a thermophilic sulfur-oxidizing chemolithoautotroph isolated from a deep-sea hydrothermal field, Southern Okinawa Trough.
International journal of systematic and evolutionary microbiology, Mar. 2008
58, Pt 3, 676, 81 - Kiyotaka Takishita; Yoshihiro Fujiwara; Masaru Kawato; Natsuki Kakizoe; Masayuki Miyazaki; Tadashi Maruyama
Molecular identification of the ichthyosporean protist "Pseudoperkinsus tapetis" from the mytilid mussel Adipicola pacifica associated with submerged whale carcasses in Japan.
Marine biotechnology (New York, N.Y.), 2008
10, 1, 13, 8 - Takuro Nunoura; Hanako Oida; Masayuki Miyazaki; Yohey Suzuki; Ken Takai; Koki Horikoshi
Desulfothermus okinawensis sp. nov., a thermophilic and heterotrophic sulfate-reducing bacterium isolated from a deep-sea hydrothermal field.
International journal of systematic and evolutionary microbiology, Oct. 2007
57, Pt 10, 2360, 2364 - Atsushi Kurata; Masayuki Miyazaki; Tohru Kobayashi; Yuichi Nogi; Koki Horikoshi
Alkalimonas collagenimarina sp. nov., a psychrotolerant, obligate alkaliphile isolated from deep-sea sediment.
International journal of systematic and evolutionary microbiology, Jul. 2007
57, Pt 7, 1549, 1553 - Yoshihiro Fujiwara; Masaru Kawato; Tomoko Yamamoto; Toshiro Yamanaka; Waka Sato-Okoshi; Chikayo Noda; Shinji Tsuchida; Tomoyuki Komai; Sherine Sonia Cubelio; Takenori Sasaki; Karen Jacobsen; Kaoru Kubokawa; Katsunori Fujikura; Tadashi Maruyama; Yasuo Furushima; Kenji Okoshi; Hiroshi Miyake; Masayuki Miyazaki; Yuichi Nogi; Akiko Yatabe; Takashi Okutani
Three-year investigations into sperm whale-fall ecosystems in Japan
Marine Ecology, Mar. 2007
28, 1, 219, 232 - Takuro Nunoura; Hanako Oida; Masayuki Miyazaki; Yohey Suzuki; Ken Takai; Koki Horikoshi
Marinitoga okinawensis sp. nov., a novel thermophilic and anaerobic heterotroph isolated from a deep-sea hydrothermal field, Southern Okinawa Trough.
International journal of systematic and evolutionary microbiology, Mar. 2007
57, Pt 3, 467, 471 - Yuji Hatada; Norio Masuda; Masatake Akita; Masayuki Miyazaki; Yukari Ohta; Koki Horikoshi
Oxidatively stable maltopentaose-producing α-amylase from a deep-sea Bacillus isolate, and mechanism of its oxidative stability validated by site-directed mutagenesis
Enzyme and Microbial Technology, 03 Oct. 2006
39, 6, 1333, 1340 - Ken Takai; Masae Suzuki; Satoshi Nakagawa; Masayuki Miyazaki; Yohey Suzuki; Fumio Inagaki; Koki Horikoshi
Sulfurimonas paralvinellae sp. nov., a novel mesophilic, hydrogen- and sulfur-oxidizing chemolithoautotroph within the Epsilonproteobacteria isolated from a deep-sea hydrothermal vent polychaete nest, reclassification of Thiomicrospira denitrificans as Sulfurimonas denitrificans comb. nov. and emended description of the genus Sulfurimonas.
International journal of systematic and evolutionary microbiology, Aug. 2006
56, Pt 8, 1725, 1733 - Ken Takai; Masayuki Miyazaki; Takuro Nunoura; Hisako Hirayama; Hanako Oida; Yasuo Furushima; Hiroyuki Yamamoto; Koki Horikoshi
Sulfurivirga caldicuralii gen. nov., sp. nov., a novel microaerobic, thermophilic, thiosulfate-oxidizing chemolithoautotroph, isolated from a shallow marine hydrothermal system occurring in a coral reef, Japan.
International journal of systematic and evolutionary microbiology, Aug. 2006
56, Pt 8, 1921, 1929 - Masayuki Miyazaki; Yuichi Nogi; Ron Usami; Koki Horikoshi
Shewanella surugensis sp. nov., Shewanella kaireitica sp. nov. and Shewanella abyssi sp. nov., isolated from deep-sea sediments of Suruga Bay, Japan.
International journal of systematic and evolutionary microbiology, Jul. 2006
56, Pt 7, 1607, 1613 - Tamegai H; Furukawa T; Nitta J; Chikuma S; Miyazaki M; Nogi Y; Arakawa S; Kato C; Horikoshi K
Halomonas sp. strain DT-W, a halophile from the 11,000 m-depth of the Mariana Trench
Journal of Japanese Society for Extremophiles, 2006
5, 1, 27, 33 - Yukari Ohta; Yuji Hatada; Masayuki Miyazaki; Yuichi Nogi; Susumu Ito; Koki Horikoshi
Purification and characterization of a novel alpha-agarase from a Thalassomonas sp.
Current microbiology, Apr. 2005
50, 4, 212, 6 - Ken Takai; Craig L Moyer; Masayuki Miyazaki; Yuichi Nogi; Hisako Hirayama; Kenneth H Nealson; Koki Horikoshi
Marinobacter alkaliphilus sp. nov., a novel alkaliphilic bacterium isolated from subseafloor alkaline serpentine mud from Ocean Drilling Program Site 1200 at South Chamorro Seamount, Mariana Forearc.
Extremophiles : life under extreme conditions, Feb. 2005
9, 1, 17, 27 - Tamegai H; Nakamura S; Miyazaki M; Nogi Y; Kasahara R; Kato C; Horikoshi K
Physiological properties of Pseudomonas sp. strain MT-1, denitrifier from the 11,000m-depth of Mariana Trench
Journal of Japanese Society for Extremophiles, 2005
4, 1, 25, 31 - Y. Ohta; Y. Hatada; Y. Nogi; M. Miyazaki; Z. Li; M. Akita; Y. Hidaka; S. Goda; S. Ito; K. Horikoshi
Enzymatic properties and nucleotide and amino acid sequences of a thermostable β-agarase from a novel species of deep-sea Microbulbifer
Applied Microbiology and Biotechnology, May 2004
64, 4, 505, 514 - Yukari Ohta; Yuichi Nogi; Masayuki Miyazaki; Zhijun Li; Yuji Hatada; Susumu Ito; Koki Horikoshi
Enzymatic properties and nucleotide and amino acid sequences of a thermostable beta-agarase from the novel marine isolate, JAMB-A94.
Bioscience, biotechnology, and biochemistry, May 2004
68, 5, 1073, 81
Misc.
- 藤原義弘; SUMIDA Paulo; 河戸勝; 宮崎征行; 植松勝之; 山中寿朗; 奥谷喬司; 豊福高志; 北里洋
QUELLE2013ブラジル航海における世界最深鯨骨生物群集の発見
ブルーアース要旨集, 2014
2014 - 宮崎,征行; 河戸,勝; 梅津,裕一; 山本,智子; 藤原,義弘
PK-026 鯨骨域に生息する多毛類共生細菌の分離とその性状解析(共生・相互作用,ポスター発表)
日本微生物生態学会講演要旨集, 17 Nov. 2013
142 - 藤原義弘; 河戸勝; 宮崎征行; 古島靖夫; 結城仁夫; 岩崎弘倫; FLORENCE Pradillon; 永堀淳志; 篠崎鮎太; 谷田部明子; 丸山正
鯨骨生態系の遷移初期の解明
ブルーアース要旨集, 2013
2013 - 藤原義弘; PRADILLON F.; 河戸勝; 笠谷貴史; 宮崎征行; 篠崎鮎太; 永堀淳志; 梅津裕一; 青木美澄; 山本智子
深海生物の分散に水深が与える影響の解明-NT10-07leg1航海概要-
ブルーアース要旨集, 2011
2011 - 藤原義弘; 河戸勝; PRADILLON F.; 宮崎征行; 篠崎鮎太; 永堀淳志; 梅津裕一; 白山義久; 西本篤史; 山本智子; 西村明日香; 大越健嗣; 伊藤希; 島村翔; 佐藤薫; 三森亮介; 雨宮健太郎; 窪川かおる; 芳賀拓真; HIGGS N.; ZBINDEN M.; 岩本久則
化学合成共生システムの進化における生物起源還元環境の役割の解明-YK09-04,NT09-10航海概要-
Blue Earth要旨集, 2010
2010 - 梅津裕一; 梅津裕一; 河戸勝; PRADILLON Florence; 宮崎征行; 植松勝之; 三宅裕志; 藤原義弘
ホネクイハナムシ類共生細菌の多様性に関する研究
Blue Earth要旨集, 2010
2010 - 関口峻允; 関口峻允; 宮崎征行; 雑賀あずさ; 佐藤孝子; 河戸勝; 栢知子; 植松勝之; 榎牧子; 能木裕一; 兼廣春之; 加藤千明
千島海溝,日本海溝からの生分解性プラスチック分解微生物の分離
日本農芸化学会大会講演要旨集, 2009
2009 - 関口峻允; 関口峻允; 宮崎征行; 雜賀あずさ; 佐藤孝子; 河戸勝; 柏知子; 植松勝之; 榎牧子; 能木裕一; 兼廣春之; 加藤千明
千島海溝,日本海溝からの生分解性プラスチック分解微生物の分離
マリンバイオテクノロジー学会大会講演要旨集, 2009
12th - 藤原義弘; 河戸勝; PRADILLON Florence; 宮崎征行; 能木裕一; 木下吟; 篠崎鮎太; 永堀淳志; 藤倉克則; 丸山正; 野田智佳代; 山本智子; 山中寿朗; 宮崎淳一; 三宅裕志; 窪川かおる
鯨骨生態系における多様性,共生および進化-鯨骨生態系2003-2008-
Blue Earth要旨集, 2009
2009 - 宮崎征行; 藤原義弘; 河戸勝; 窪川かおる; 山本智子; 山中寿朗; 三宅裕志; 長濱統彦; 能木裕一
鯨骨生態2003-2008~鯨骨生物群集における微生物多様性と変遷~
Blue Earth要旨集, 2009
2009 - 関口峻允; 藤岡明日香; 榎牧子; 兼廣春之; 野村幸司; 渡部俊広; 渡邉徹; 藤本裕; 宮崎征行; 佐藤孝子; 河戸勝; 能木裕一; 加藤千明
深海環境における生分解性プラスチックの分解性と分解微生物の分離
日本水産学会大会講演要旨集, 2009
2009 - Hatada Y; Nogi Y; Miyazaki M; Ohta Y
Exploration of Deep-sea Bioresource
Journal of Japanese Society for Extremophiles, 2009
8, 2, 85, 91 - Nagahama Takahiko; Takahashi Eriko; Nagano Yuriko; Miyazaki Masayuki; Nogi Yuichi; Horikoshi Koki
Detection and Diversity of chytrids from environmental DNA in Deep-sea
Abstracts of Papers Presented at the Meeting of the Mycological Society of Japan, 2009
53, 0, 78, 78 - 宮崎征行; 能木裕一; 藤原義弘; 河戸勝; 長濱統彦; 掘越弘毅; 山本智子; 山中寿郎; 三宅裕志; 窪川かおる
ホネクイハナムシ共生細菌近縁分離株の同定
しんかいシンポジウム予稿集, 2008
24th - 藤原義弘; 河戸勝; 野田智佳代; 野田智佳代; 山本智子; 山中寿朗; 宮崎征行; 谷田部明子; 谷田部明子; 三宅裕志; 三宅裕志; 藤倉克則; 古島靖夫; 田原淳一郎; 中條秀彦; 青木太郎; 丸山正; 窪川かおる
鯨骨を用いた実験的生物地理学
しんかいシンポジウム予稿集, 2007
23rd - 窪川かおる; 丹藤由希子; 山本智子; 丸山正; 藤原義弘; 古島靖夫; 吉田尊雄; 瀧下清貴; 河戸勝; 宮崎征行; 荒川康; 山中寿朗; 足立文; 浦野明央; 早川正宏; 榎本清
鯨骨生物群集で発見された新種ナメクジウオの環境適応能に関する研究:鯨骨生物群集の遷移と深海底の食物連鎖系において果たす役割に関する研究:鯨骨ステッピング・ストーン仮説は誤りか?-鯨骨域および熱水域における現場検証実験
海洋研究開発機構航海概要報告(CD-ROM), 2007
2005 - 宮崎征行; 能木裕一; 長濱統彦; 小林英城; 藤原義弘; 河戸勝; 加藤千明; 掘越弘毅; 荒川康; 宮崎淳一; 窪川かおる
鯨骨域における微生物多様性の変遷
しんかいシンポジウム予稿集, 2007
23rd - 山中寿朗; 山本智子; 三宅裕志; 窪川かおる; 藤原義弘; 大越健嗣; 岡村慶; 木村浩之; 藤野恵子; 前藤晃太郎; 杉山拓; 河戸勝; 宮崎征行; 野田智佳代; 伊藤寿茂; 川野昭太; 伊藤希; 井戸美帆
若尊海底火山の地質構造とそれに伴う熱水鉱化作用の解明 鯨骨生物群集の遷移と食物連鎖を通して深海底において果たす役割に関する研究 コトクラゲの生態学的研究
海洋研究開発機構航海概要報告書&運航実績一覧&航跡図&運航線表(CD-ROM), 2007
2007 - 荒川康; 能木裕一; 宮崎征行; 藤原義弘; 河戸勝; 松山和世; 佐藤孝子; 加藤千明; 窪川かおる; 三宅裕志; 長沼毅; 岡村行信; 宇佐美論
鯨骨近縁部における微生物多様性の変遷および日本近海の冷水湧出域に特徴的な微生物群集
しんかいシンポジウム予稿集, 2006
22nd - 藤原義弘; 藤倉克則; 藤田祐子; 古島靖夫; JACOBSEN Karen; 河戸勝; 久保信隆; 窪川かおる; 久野聡子; 万福真実; 三宅裕志; 宮崎征行; 宮沢明里; 溝田智俊; 能木裕一; 大畑和代; 大越健嗣; 奥谷喬司; 尾崎健一; 平智之; 塚原潤三; 植松勝之; 山本智子; 山中寿朗; 谷田部明子; 青木美澄; 田中仁氏
鹿児島県野間岬沖・鯨骨生物群集調査-鯨骨ステッピング・ストーン仮説の検証と群集の遷移
しんかいシンポジウム予稿集, 2005
21st
