Researcher Information
researchmap URL
Research activity information
Papers
- Yuto Fukuyama; Sanae Sakai; Yoko Chiba; Shigeru Shimamura; Satoshi Hiraoka; Tomoyuki Wakashima; Takuro Nunoura; Ken Takai
Direct carbon monoxide fixation via the bacterial and archaeal Wood–Ljungdahl pathways
30 Oct. 2025 - Yu Su; Yuta Michimori; Yuto Fukuyama; Shigeru Shimamura; Takuro Nunoura; Haruyuki Atomi
TK2268 encodes the major aminotransferase involved in the conversion from oxaloacetic acid to aspartic acid in Thermococcus kodakarensis
Applied and Environmental Microbiology, 19 Mar. 2025 - Yoko Chiba; Tomomi Sumida; Masafumi Kameya; Yuto Fukuyama; Tomoyuki Wakashima; Shigeru Shimamura; Ryoma Kamikawa; Yoshito Chikaraishi; Takuro Nunoura
Impact of acetate on CO2 fixation pathways in thermophilic and hydrogenotrophic bacteria
ISME Communications, 17 Jan. 2025 - Yuta Michimori; Rikihisa Izaki; Yu Su; Yuto Fukuyama; Shigeru Shimamura; Karin Nishimura; Yuya Miwa; Sotaro Hamakita; Takahiro Shimosaka; Yuki Makino; Ryo Takeno; Takaaki Sato; Haruki Beppu; Isaac Cann; Tamotsu Kanai; Takuro Nunoura; Haruyuki Atomi
Removal of phosphoglycolate in hyperthermophilic archaea
Proceedings of the National Academy of Sciences, 16 Apr. 2024 - Yuto Fukuyama, Shigeru Shimamura, Sanae Sakai, Yuta Michimori, Tomomi Sumida, Yoshito Chikaraishi, Haruyuki Atomi, Takuro Nunoura
Development of a rapid and highly accurate method for 13C tracer-based metabolomics and its application on a hydrogenotrophic methanogen
ISME Communications, 10 Jan. 2024
4, 1, 1, 11
[Reviewed] - Kimiho Omae; Tatsuki Oguro; Masao Inoue; Yuto Fukuyama; Takashi Yoshida; Yoshihiko Sako
Diversity analysis of thermophilic hydrogenogenic carboxydotrophs by carbon monoxide dehydrogenase amplicon sequencing using new primers
Extremophiles, Jan. 2021
25, 1, 61, 76 - Masao Inoue; Ayumi Tanimura; Yuto Fukuyama; Suguru Okunishi; Hiroto Maeda; Takashi Yoshida; Yoshihiko Sako
Draft Genome Sequence of Thermanaeromonas sp. Strain C210, Isolated in the Presence of Carbon Monoxide
Microbiology Resource Announcements, 13 Aug. 2020
9, 33 - Masao Inoue; Hikaru Izumihara; Yuto Fukuyama; Kimiho Omae; Takashi Yoshida; Yoshihiko Sako
Carbon monoxide-dependent transcriptional changes in a thermophilic, carbon monoxide-utilizing, hydrogen-evolving bacterium Calderihabitans maritimus KKC1 revealed by transcriptomic analysis.
Extremophiles : life under extreme conditions, Jul. 2020
24, 4, 551, 564
[Reviewed] - Fukuyama, Y.; Inoue, M.; Omae, K.; Yoshida, T.; Sako, Y.
Anaerobic and hydrogenogenic carbon monoxide-oxidizing prokaryotes: Versatile microbial conversion of a toxic gas into an available energy
Advances in Applied Microbiology, 2020
[Reviewed] - Omae, K.; Fukuyama, Y.; Yasuda, H.; Mise, K.; Yoshida, T.; Sako, Y.
Diversity and distribution of thermophilic hydrogenogenic carboxydotrophs revealed by microbial community analysis in sediments from multiple hydrothermal environments in Japan
Archives of Microbiology, 2019
201, 7
[Reviewed] - Fukuyama, Y.; Tanimura, A.; Inoue, M.; Omae, K.; Yoshida, T.; Sako, Y.
Draft genome sequences of two thermophilic moorella sp. Strains, isolated from an acidic hot spring in Japan
Microbiology Resource Announcements, 2019
8, 31
[Reviewed] - Fukuyama, Y.; Omae, K.; Yoshida, T.; Sako, Y.
Transcriptome analysis of a thermophilic and hydrogenogenic carboxydotroph Carboxydothermus pertinax
Extremophiles, 2019
23, 4
[Reviewed] - Fukuyama, Y.; Omae, K.; Yoneda, Y.; Yoshida, T.; Sako, Y.
Insight into energy conservation via alternative carbon monoxide metabolism in Carboxydothermus pertinax revealed by comparative genome analysis
Applied and Environmental Microbiology, 2018
84, 14
[Reviewed] - Fukuyama, Y.; Oguro, T.; Omae, K.; Yoneda, Y.; Yoshida, T.; Sako, Y.
Draft genome sequences of two hydrogenogenic carboxydotrophic bacteria, Carboxydocella sp. Strains JDF658 and ULO1, isolated from two distinct volcanic fronts in Japan
Genome Announcements, 2017
5, 16
[Reviewed] - Fukuyama, Y.; Omae, K.; Yoneda, Y.; Yoshida, T.; Sako, Y.
Draft genome sequences of Carboxydothermus pertinax and C. islandicus, hydrogenogenic carboxydotrophic bacteria
Genome Announcements, 2017
5, 8
[Reviewed] - Omae, K.; Yoneda, Y.; Fukuyama, Y.; Yoshida, T.; Sako, Y.
Genomic analysis of Calderihabitans maritimus KKC1, a thermophilic, hydrogenogenic, carboxydotrophic bacterium isolated from marine sediment
Applied and Environmental Microbiology, 2017
83, 15
[Reviewed] - Yoneda, Y.; Kano, S.I.; Yoshida, T.; Ikeda, E.; Fukuyama, Y.; Omae, K.; Kimura-Sakai, S.; Daifuku, T.; Watanabe, T.; Sako, Y.
Detection of anaerobic carbon monoxide-oxidizing thermophiles in hydrothermal environments
FEMS Microbiology Ecology, 2015
91, 9
[Reviewed] - Inoue, T.; Takao, K.; Fukuyama, Y.; Yoshida, T.; Sako, Y.
Over-expression of carbon monoxide dehydrogenase-I with an accessory protein co-expression: A key enzyme for carbon dioxide reduction
Bioscience, Biotechnology and Biochemistry, 2014
78, 4
[Reviewed]
Misc.
- 大前公保; 福山宥斗; 大黒達希; 大神優祐; 安田尚登; 吉田天士; 左子芳彦
全原核生物の16S rRNA系統における一酸化炭素(CO)デヒドロゲナーゼの分布パターンを利用した水素生成型CO資化菌の分子生態
日本水産学会大会講演要旨集, 2019
2019 - 日野太貴; 谷村あゆみ; 井上真男; 大神優佑; 福山宥斗; 大黒達希; 前田広人; 吉田天士; 左子芳彦
鹿児島湾海底堆積物からの水素生成型一酸化炭素(CO)資化性菌の分離と性状解析
日本水産学会大会講演要旨集, 2018
2018 - 大前公保; 福山宥斗; 大黒達希; 大神優祐; 吉田天士; 左子芳彦
水素生成型一酸化炭素資化性菌の生態学的機能解明に向けた陸上熱水環境における微生物群集構造解析
マリンバイオテクノロジー学会大会講演要旨集, 2017
19th - 大前公保; 米田恭子; 福山宥斗; 吉田天士; 左子芳彦
水素生成型新規一酸化炭素資化性好熱細菌Calderihabitans maritimusのゲノム解析
マリンバイオテクノロジー学会大会講演要旨集, 2016
18th - 大前公保; 米田恭子; 福山宥斗; 吉田天士; 左子芳彦
水素生成型一酸化炭素資化性菌Calderihabitans maritimus KKC1と酢酸生成菌Moorella spp.の比較ゲノム解析
日本水産学会大会講演要旨集, 2015
2015 - 大前公保; 米田恭子; 福山宥斗; 吉田天士; 左子芳彦
水素生成型一酸化炭素資化性好熱細菌Calderihabitans maritimus KKC1のゲノム解析
日本ゲノム微生物学会年会要旨集, 2015
9th - OMAE KIMIYASU; YOSHIDA TAKASHI; YONEDA KYOKO; FUKUYAMA YUTO; SAKO YOSHIHIKO
海洋性水素生成型一酸化炭素資化性好熱細菌Calderihabitans maritimus KKC1のゲノム解析
日本水産学会大会講演要旨集, 19 Sep. 2014
2014, 35 - 福山宥斗; 米田恭子; 高尾郷介; 大福高史; 井上喬裕; 吉田天士; 左子芳彦
一酸化炭素資化性好熱菌Carboxydothermus pertinaxのCO代謝
日本微生物生態学会講演要旨集, 2013
29th - 鹿野早苗; 米田恭子; 吉田天士; 北村崇行; 大福高史; 井上喬裕; 福山宥斗; 高尾郷介; 左子芳彦
熱水環境中の一酸化炭素資化性好熱菌Carboxydothermusの分子生態学的研究
日本微生物生態学会講演要旨集, 2013
29th
Books and Other Publications
Presentations
- 福山宥斗
ZipChip CE-MSを用いた微生物微量メタボローム解析の紹介
第45回キャピラリー電気泳動シンポジウム（SCE2025）, 12 Dec. 2025, [Invited] - Yuto Fukuyama; Sanae Sakai; Yoko Chiba; Shigeru Shimamura; Satoshi Hiraoka; Takuro Nunoura; Ken Takai
Direct CO fixation in the bacterial and archaeal Wood-Ljungdahl pathways revealed under hydrogenotrophic conditions
Thermophiles 2025 - 17th International Congress, 10 Sep. 2025 - Yuto Fukuyama, Shigeru Shimamura, Tomomi Sumida, Yoko Chiba, Yoshito Chikaraishi, Haruyuki Atomi, Takuro Nunoura
Assimilation of CO2 in hyperthermophilic and heterotrophic bacteria revealed by 13C tracer-based metabolomics using CE-MS
The 36th JSME & The 13th ASME, 28 Nov. 2023 - Tomoyuki Wakashima, Yuto Fukuyama, Shigeru Shimamura, Nao Tsunematsu, Takuro Nunoura, Yoko Chiba
Exploring a novel glycine biosynthesis pathway in Thermodesulfatator indicus , a thermophilic sulfate-reducing bacterium using isotopomer analysis.
第36回日本微生物生態学会, 28 Nov. 2023 - 福山宥斗、島村繁、酒井早苗、道盛裕太、澄田智美、力石嘉人、跡見晴幸、布浦拓郎
Orbitrap Fusion MSを活用した高感度且つ高精度なトレーサー解析
第17回メタボロームシンポジウム, 19 Oct. 2023 - Yuto Fukuyama
CO enrichment cultures from diverse environmental samples to isolate novel carboxydotrophs
2023年度CO world meeting, 04 Aug. 2023 - Yuto Fukuyama, Shigeru Shimamura, Sanae Sakai, Yuta Michimori, Tomomi Sumida, Yoshito Chikaraishi, Haruyuki Atomi, Takuro Nunoura
A novel CE-MS-based tracer metabolomics: a promising tool to verify real amino acid biosynthetic pathways and central carbon metabolic pathways in any kinds of archaeal isolates
Gordon Research Conference "Archaea: Ecology, Metabolism and Molecular Biology", 26 Jul. 2023 - Fukuyama F, Shimamura S, Sakai S, Michimori Y, Sumida Y, Chikaraishi Y, Atomi H, Nunoura T
A novel CE-MS based tracer metabolomics: a promising tool to verify real amino acid biosynthetic pathways and central carbon metabolic pathway in any kinds of microbial isolates.
Gordon Research Conference: Archaea: Ecology, Metabolism and Molecular Biology, 25 Jul. 2023 - 福山宥斗, 島村繁, 澄田智美, 酒井早苗, 跡見晴幸, 布浦拓郎
微量メタボローム解析を用いたMethanothermobacter thermautotrophicusにおけるアミノ酸生合成系の代謝ギャップの探索
第35回日本Archaea研究会, 30 Jun. 2023 - Yuto Fukuyama
Current view of CO utilizing microorganisms
Workshop on Chemical Roots of Metabolism, 16 Jan. 2023 - 福山 宥斗, 島村 繁, 澄田 智美, 力石 嘉人,千葉 洋子, 跡見 晴幸, 布浦 拓郎
微量メタボローム解析による従属栄養性超好熱バクテリアThermotogaのCO2再利用能の評価
The 35th annual JSME conference, 01 Nov. 2022 - 福山宥斗、澄田智美、島村繁、千葉洋子、力石嘉人、跡見晴幸、布浦拓郎
従属栄養性超好熱バクテリアThermotoga maritimaにおける微量メタボローム解析を用いたCO2再利用能の評価
新学術領域研究「超地球生命体を解き明かすポストコッホ機能生態学」若手交流ポスター発表会, 02 Sep. 2022 - Yuto Fukuyama, Tomomi Sumida, Shigeru Shimamura, Yoko Chiba, Hisato Chikaraishi, Haruyuki Atomi, Takuro Nunoura
Reassimilation of CO2 and acetate in Thermotoga maritima revealed by 13C isotope tracing experiments using microfluidic capillary electrophoresis-mass spectrometry
Gordon Research Conference on Molecular Basis of Microbial One-Carbon Metabolism, 08 Aug. 2022 - 福山宥斗、澄田智美、島村繁、酒井早苗、跡見晴幸、布浦拓郎
微量メタボローム解析を用いたMethanothermobacter thermautotrophicusにおけるアミノ酸生合成系の再構築
第34回日本Archaea研究会講演会, 15 Jul. 2022 - 福山宥斗、澄田智美、島村繁、千葉洋子、力石嘉人、跡見晴幸、布浦拓郎
超高分解能質量分析装置を用いた微量メタボローム解析
令和3年度第3回「ポストコッホ生体」領域会議, 28 May 2021
